RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ZNRF3Q9ULT6 936 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 POLR3KQ9Y2Y1 108 aaPredicted RBP9.11□□□□□ -0.95
CLK4-202ENST00000519132 ZFYVE9O95405 1425 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 FAM83GA6ND36 823 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 CCNJLQ8IV13 435 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 BRD7Q9NPI1 651 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 PCDHB14Q9Y5E9 798 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
CLK4-202ENST00000519132 IDI1Q13907 227 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 UBE4AQ14139 1066 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 NBPF8Q3BBV2 869 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 GATAD2BQ8WXI9 593 aa9.11□□□□□ -0.95
CLK4-202ENST00000519132 TYW1Q9NV66 732 aaKnown RBP9.11□□□□□ -0.95
CLK4-202ENST00000519132 TNRQ92752 1358 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 MAFGO15525 162 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 LDHAP00338 332 aaKnown RBP9.1□□□□□ -0.95
CLK4-202ENST00000519132 GUCY2FP51841 1108 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 PABPC4Q13310 644 aaKnown RBP eCLIP9.1□□□□□ -0.95
CLK4-202ENST00000519132 GSX2Q9BZM3 304 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 RUBCNLQ9H714 662 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 A0A1W2PQH9 124 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 J3QL48 77 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 DNAJA2O60884 412 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 FXNQ16595 210 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 IER5Q5VY09 327 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 CORINQ9Y5Q5 1042 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 MYO3AQ8NEV4 1616 aa9.1□□□□□ -0.95
CLK4-202ENST00000519132 ZNF142P52746 1687 aaPredicted RBP9.1□□□□□ -0.95
CLK4-202ENST00000519132 STRN3Q13033 797 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
CLK4-202ENST00000519132 KRT26Q7Z3Y9 468 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 NLRP13Q86W25 1043 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 GPATCH11Q8N954 259 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 JMYQ8N9B5 988 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 COG1Q8WTW3 980 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 MTMR8Q96EF0 704 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
CLK4-202ENST00000519132 EXOC2Q96KP1 924 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 ARPC5LQ9BPX5 153 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 SETD1BQ9UPS6 1966 aaKnown RBP9.09□□□□□ -0.95
CLK4-202ENST00000519132 A2ML1A8K2U0 1454 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 GPRASP1Q5JY77 1395 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 RALBP1Q15311 655 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 RGL3Q3MIN7 710 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 TTC39BQ5VTQ0 682 aaPredicted RBP9.09□□□□□ -0.95
CLK4-202ENST00000519132 NCAPG2Q86XI2 1143 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 IL17RAQ96F46 866 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
CLK4-202ENST00000519132 SDSP20132 328 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 OS9Q13438 667 aaPredicted RBP9.09□□□□□ -0.95
CLK4-202ENST00000519132 GNASQ5JWF2 1037 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 CNNM4Q6P4Q7 775 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 SLC4A10Q6U841 1118 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 SKAP1Q86WV1 359 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 ANKLE1Q8NAG6 615 aa9.09□□□□□ -0.95
CLK4-202ENST00000519132 SETBP1Q9Y6X0 1596 aa9.08□□□□□ -0.96
CLK4-202ENST00000519132 AKAP10O43572 662 aa9.08□□□□□ -0.96
CLK4-202ENST00000519132 CHAC2Q8WUX2 184 aa9.08□□□□□ -0.96
CLK4-202ENST00000519132 RTFDC1Q9BY42 306 aaPredicted RBP9.08□□□□□ -0.96
CLK4-202ENST00000519132 ATF3P18847 181 aa9.08□□□□□ -0.96
CLK4-202ENST00000519132 COL9A2Q14055 689 aaPredicted RBP9.08□□□□□ -0.96
CLK4-202ENST00000519132 IQGAP1P46940 1657 aa9.08□□□□□ -0.96
CLK4-202ENST00000519132 PIK3C2GO75747 1445 aa9.08□□□□□ -0.96
CLK4-202ENST00000519132 ACRP10323 421 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 NBPF10Q6P3W6 841 aaKnown RBP9.07□□□□□ -0.96
CLK4-202ENST00000519132 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
CLK4-202ENST00000519132 LTBP3Q9NS15 1303 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 A0A1W2PNR3 127 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 EDN3P14138 238 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 TIMP2P16035 220 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 MLLT1Q03111 559 aaPredicted RBP9.07□□□□□ -0.96
CLK4-202ENST00000519132 SFSWAPQ12872 951 aaKnown RBP9.07□□□□□ -0.96
CLK4-202ENST00000519132 CWF19L2Q2TBE0 894 aaKnown RBP9.07□□□□□ -0.96
CLK4-202ENST00000519132 FAM209AQ5JX71 171 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 HFE2Q6ZVN8 426 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 GAL3ST3Q96A11 431 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 TIFAQ96CG3 184 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 MFSD3Q96ES6 412 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 SELPP16109 830 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 NINJ1Q92982 152 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 MUC3BQ9H195 1237 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 MIR1-1HGQ9H1L0 117 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 PPM1HQ9ULR3 514 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
CLK4-202ENST00000519132 TATP17735 454 aaPredicted RBP9.06□□□□□ -0.96
CLK4-202ENST00000519132 ATP11AP98196 1134 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 FOXC1Q12948 553 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 SKOR2Q2VWA4 1001 aaPredicted RBP9.06□□□□□ -0.96
CLK4-202ENST00000519132 CLGNO14967 610 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 SH3BP5O60239 455 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 PERM1Q5SV97 790 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 PPP4R4Q6NUP7 873 aa9.06□□□□□ -0.96
CLK4-202ENST00000519132 CCAR1Q8IX12 1150 aaKnown RBP9.06□□□□□ -0.96
CLK4-202ENST00000519132 ATL2Q8NHH9 583 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms