RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 CABP4P57796 275 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 IKBKEQ14164 716 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 DDR2Q16832 855 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 REXO1Q8N1G1 1221 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 CELF2-AS1Q8N7Q2 184 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 GRIN3AQ8TCU5 1115 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 TNFRSF25Q93038 417 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 TRIM47Q96LD4 638 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 POLR3GLQ9BT43 218 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 ADAM19Q9H013 955 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 AVENQ9NQS1 362 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 ARHGAP31Q2M1Z3 1444 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 REREQ9P2R6 1566 aa6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 ZC3H13Q5T200 1668 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-212ENST00000518919 TRIM37O94972 964 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 CLCQ05315 142 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 IFRD2Q12894 506 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 LARP1BQ659C4 914 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 LSRQ86X29 649 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 RNPC3Q96LT9 517 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 LPIN3Q9BQK8 851 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 SH2B1Q9NRF2 756 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 MAPK8IP1Q9UQF2 711 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 ADGRF5Q8IZF2 1346 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 PIK3C2GO75747 1445 aa6.38□□□□□ -1.39
CTNNA1-212ENST00000518919 KIF1BO60333 1816 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 MYO3AQ8NEV4 1616 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 ADGRB1O14514 1584 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 ARHGEF40Q8TER5 1519 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 PARD3Q8TEW0 1356 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 C2CD2LO14523 706 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 ADH6P28332 368 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 CDC27P30260 824 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 RPL6Q02878 288 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 AP3B2Q13367 1082 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 LAPTM4AQ15012 233 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 RNF187Q5TA31 235 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 MAP1SQ66K74 1059 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 SV2AQ7L0J3 742 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 VWA5B2Q8N398 1253 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 CCDC113Q9H0I3 377 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 ST7Q9NRC1 585 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 FRRS1LQ9P0K9 344 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
CTNNA1-212ENST00000518919 PPLO60437 1756 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 SETBP1Q9Y6X0 1596 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 AGLP35573 1532 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 NEXMIFQ5QGS0 1516 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 H3BRJ5 948 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 PPFIA3O75145 1194 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 GSTP1P09211 210 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 ARAFP10398 606 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 MX2P20592 715 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 EPHA1P21709 976 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 CHMP4BP1P59074 171 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 ZNF252P-AS1Q0IIN9 211 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 FXNQ16595 210 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 SCARA3Q6AZY7 606 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 PSAPL1Q6NUJ1 521 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 KANK3Q6NY19 840 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 GGT6Q6P531 493 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 KCNB2Q92953 911 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 MYOM1P52179 1685 aa6.36□□□□□ -1.39
CTNNA1-212ENST00000518919 ERVK-7P63135 1459 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 KTN1Q86UP2 1357 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 ADARB2-AS1A8MUL3 147 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 PDPK1O15530 556 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 GRIN3BO60391 1043 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 CDC45O75419 566 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 PTPN11Q06124 597 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 PPP2R5EQ16537 467 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 PTPROQ16827 1216 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 PDZD3Q86UT5 571 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 RBBP8NLQ8NC74 664 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 SH3TC2Q8TF17 1288 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 GPATCH3Q96I76 525 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 EHMT1Q9H9B1 1298 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 GMPR2Q9P2T1 348 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 POLR3KQ9Y2Y1 108 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 ASXL1Q8IXJ9 1541 aa6.35□□□□□ -1.39
CTNNA1-212ENST00000518919 KIF13AQ9H1H9 1805 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 BRD4O60885 1362 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 LRPPRCP42704 1394 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 EIF3AQ14152 1382 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 ZBED9Q6R2W3 1325 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 MYBBP1AQ9BQG0 1328 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 WASHC2CQ9Y4E1 1318 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 PREX1Q8TCU6 1659 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 CDC25BP30305 580 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 TMF1P82094 1093 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 GSTM4Q03013 218 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 RASGRF1Q13972 1273 aa6.34□□□□□ -1.39
CTNNA1-212ENST00000518919 PLEKHG4Q58EX7 1191 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms