RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ENAHQ8N8S7 591 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 ANKS1AQ92625 1134 aa17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 DYNLL2Q96FJ2 89 aa17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
TRAPPC9-205ENST00000518839 STK36Q9NRP7 1315 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 H3BQV1 296 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 TSPY3P0CV98 308 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 TSPY8P0CW00 308 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 RTN1Q16799 776 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 IFFO2Q5TF58 517 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 DDX11Q96FC9 970 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 EHD4Q9H223 541 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 DICER1Q9UPY3 1922 aaKnown RBP17.58■□□□□ 0.4
TRAPPC9-205ENST00000518839 MYH6P13533 1939 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 ENTPD3O75355 529 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 RASA1P20936 1047 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 EVX2Q03828 476 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 GABPAQ06546 454 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 CXCL9Q07325 125 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 SERPINB13Q9UIV8 391 aa17.57■□□□□ 0.4
TRAPPC9-205ENST00000518839 PLIN4Q96Q06 1357 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 IFNAR1P17181 557 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 DLGAP5Q15398 846 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 SKOR2Q2VWA4 1001 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 WASF1Q92558 559 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 ZSCAN16Q9H4T2 348 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-205ENST00000518839 TCHHQ07283 1943 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 MYH15Q9Y2K3 1946 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 CDC27P30260 824 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 ADD1P35611 737 aaKnown RBP17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 SSRP1Q08945 709 aaKnown RBP17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 MCTP1Q6DN14 999 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
TRAPPC9-205ENST00000518839 SIPA1L1O43166 1804 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 NFIAQ12857 509 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 NTRK3Q16288 839 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 FKBP1CQ5VVH2 108 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 CTCFLQ8NI51 663 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 CCDC17Q96LX7 622 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 PI4KBQ9UBF8 816 aa17.54■□□□□ 0.4
TRAPPC9-205ENST00000518839 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 MYO1BO43795 1136 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 FMNL1O95466 1100 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 FDPSP14324 419 aaKnown RBP17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 RXRAP19793 462 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 KIF5BP33176 963 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 TROAPQ12815 778 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 CDC37L1Q7L3B6 337 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 PRMT6Q96LA8 375 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 TDRD3Q9H7E2 651 aaKnown RBP17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 FAM198AQ9UFP1 575 aa17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC9-205ENST00000518839 FZD9O00144 591 aa17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 GNAQP50148 359 aa17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 RASSF7Q02833 373 aa17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 RNF26Q9BY78 433 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 PCDHAC2Q9Y5I4 1007 aa17.52■□□□□ 0.4
TRAPPC9-205ENST00000518839 NMT2O60551 498 aa17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 TRIM29Q14134 588 aa17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 ZSCAN29Q8IWY8 852 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 DPF2Q92785 391 aa17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 FHDC1Q9C0D6 1143 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 RBM27Q9P2N5 1060 aaKnown RBP17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 ZNF70Q9UC06 446 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC9-205ENST00000518839 SBF1O95248 1867 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms