RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 EIF4A1P60842 406 aaKnown RBP7.98□□□□□ -1.13
PABPC1-207ENST00000518716 C4orf17Q53FE4 359 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 EFHC2Q5JST6 749 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 PRSS36Q5K4E3 855 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 CTU1Q7Z7A3 348 aaKnown RBP7.98□□□□□ -1.13
PABPC1-207ENST00000518716 ZNF408Q9H9D4 720 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
PABPC1-207ENST00000518716 LAMB4A4D0S4 1761 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 MKI67P46013 3256 aaKnown RBP7.97□□□□□ -1.13
PABPC1-207ENST00000518716 H7C1D1 291 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 USP17L8P0C7I0 530 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 PARP10Q53GL7 1025 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
PABPC1-207ENST00000518716 FCHSD1Q86WN1 690 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 NGEFQ8N5V2 710 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 RTF1Q92541 710 aaKnown RBP7.97□□□□□ -1.13
PABPC1-207ENST00000518716 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
PABPC1-207ENST00000518716 GBA2Q9HCG7 927 aaPredicted RBP7.97□□□□□ -1.13
PABPC1-207ENST00000518716 RRP7AQ9Y3A4 280 aaKnown RBP7.97□□□□□ -1.13
PABPC1-207ENST00000518716 AKAP11Q9UKA4 1901 aa7.96□□□□□ -1.13
PABPC1-207ENST00000518716 PSMD14O00487 310 aa7.96□□□□□ -1.14
PABPC1-207ENST00000518716 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
PABPC1-207ENST00000518716 KIF6Q6ZMV9 814 aa7.96□□□□□ -1.14
PABPC1-207ENST00000518716 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
PABPC1-207ENST00000518716 PPP1R42Q7Z4L9 355 aa7.96□□□□□ -1.14
PABPC1-207ENST00000518716 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
PABPC1-207ENST00000518716 UTP14AQ9BVJ6 771 aaKnown RBP7.96□□□□□ -1.14
PABPC1-207ENST00000518716 KDM3BQ7LBC6 1761 aa7.96□□□□□ -1.14
PABPC1-207ENST00000518716 RTL9Q8NET4 1388 aa7.96□□□□□ -1.14
PABPC1-207ENST00000518716 CEP290O15078 2479 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 ANKRD36CQ5JPF3 1778 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 ADM5C9JUS6 153 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 RPS12P25398 132 aaKnown RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 ZNF157P51786 506 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 GRAPQ13588 217 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 SKIV2LQ15477 1246 aaKnown RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 PKN2Q16513 984 aaKnown RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 C2orf69Q8N8R5 385 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 GRAPLQ8TC17 118 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 PNISRQ8TF01 805 aaKnown RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 DNAAF2Q9NVR5 837 aaKnown RBP7.95□□□□□ -1.14
PABPC1-207ENST00000518716 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
PABPC1-207ENST00000518716 TAF1P21675 1872 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 GNRH1P01148 92 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 VIL1P09327 827 aaKnown RBP7.94□□□□□ -1.14
PABPC1-207ENST00000518716 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
PABPC1-207ENST00000518716 HCLS1P14317 486 aaPredicted RBP7.94□□□□□ -1.14
PABPC1-207ENST00000518716 MYL6BP14649 208 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 ADH6P28332 368 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
PABPC1-207ENST00000518716 PROSER3Q2NL68 480 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 TBC1D10BQ4KMP7 808 aaPredicted RBP7.94□□□□□ -1.14
PABPC1-207ENST00000518716 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 NLRP10Q86W26 655 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 RASAL3Q86YV0 1011 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 PLEKHF1Q96S99 279 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 TMX4Q9H1E5 349 aaPredicted RBP7.94□□□□□ -1.14
PABPC1-207ENST00000518716 CRISPLD1Q9H336 500 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 KDM4CQ9H3R0 1056 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 POLLQ9UGP5 575 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 LRRC37AA6NMS7 1700 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 LAMB2P55268 1798 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 ZNF609O15014 1411 aa7.94□□□□□ -1.14
PABPC1-207ENST00000518716 SCN9AQ15858 1988 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 BRCA2P51587 3418 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 SZT2Q5T011 3432 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 PPP2R1AP30153 589 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 TM4SF4P48230 202 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 ZNF280AP59817 542 aaPredicted RBP7.93□□□□□ -1.14
PABPC1-207ENST00000518716 FKBP1BP68106 108 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 ZNF296Q8WUU4 475 aaPredicted RBP7.93□□□□□ -1.14
PABPC1-207ENST00000518716 CDCA5Q96FF9 252 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 GMLQ99445 158 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
PABPC1-207ENST00000518716 NUDCQ9Y266 331 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 TRIOBPQ9H2D6 2365 aa7.93□□□□□ -1.14
PABPC1-207ENST00000518716 ASTN2O75129 1339 aaPredicted RBP7.93□□□□□ -1.14
PABPC1-207ENST00000518716 COL4A1P02462 1669 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 TCIRG1Q13488 830 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 SF3B3Q15393 1217 aaKnown RBP7.92□□□□□ -1.14
PABPC1-207ENST00000518716 WASHC4Q2M389 1173 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 HABP4Q5JVS0 413 aaKnown RBP7.92□□□□□ -1.14
PABPC1-207ENST00000518716 DDX46Q7L014 1031 aaKnown RBP7.92□□□□□ -1.14
PABPC1-207ENST00000518716 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 DCPSQ96C86 337 aaKnown RBP7.92□□□□□ -1.14
PABPC1-207ENST00000518716 CFAP53Q96M91 514 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 DBNDD1Q9H9R9 158 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 HTTP42858 3142 aa7.92□□□□□ -1.14
PABPC1-207ENST00000518716 TBC1D8O95759 1140 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 GPSM2P81274 684 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 LRP8Q14114 963 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 KIF4BQ2VIQ3 1234 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 SH3D19Q5HYK7 790 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms