RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 DCTPP1Q9H773 170 aa15.02■□□□□ -0
VEGFA-218ENST00000518689 PAG1Q9NWQ8 432 aa15.02■□□□□ -0
VEGFA-218ENST00000518689 SRRDQ9UH36 339 aa15.02■□□□□ -0
VEGFA-218ENST00000518689 GDF11O95390 407 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 FMNL1O95466 1100 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-218ENST00000518689 PLCD1P51178 756 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 TATDN1Q6P1N9 297 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 SH3TC2Q8TF17 1288 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 EHD4Q9H223 541 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 AS3MTQ9HBK9 375 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 GINM1Q9NU53 330 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 SERPINB13Q9UIV8 391 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 PLXNB2O15031 1838 aa15.01□□□□□ -0.01
VEGFA-218ENST00000518689 CHGBP05060 677 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 BACE1P56817 501 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 MTMR2Q13614 643 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 NBPF11Q86T75 865 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 LCORLQ8N3X6 602 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 SMCR8Q8TEV9 937 aaPredicted RBP15□□□□□ -0.01
VEGFA-218ENST00000518689 TRIM34Q9BYJ4 488 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 PCDHB15Q9Y5E8 787 aa15□□□□□ -0.01
VEGFA-218ENST00000518689 EN2P19622 333 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-218ENST00000518689 HOXD10P28358 340 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 SHMT1P34896 483 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 ADD2P35612 726 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 EVX2Q03828 476 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 GABPAQ06546 454 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 ANKRD13CQ8N6S4 541 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 CRNKL1Q9BZJ0 848 aaKnown RBP14.99□□□□□ -0.01
VEGFA-218ENST00000518689 ASCC2Q9H1I8 757 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-218ENST00000518689 GABRQQ9UN88 632 aa14.99□□□□□ -0.01
VEGFA-218ENST00000518689 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 USP17L10C9JJH3 530 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 GH2P01242 217 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 HOXA7P31268 230 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-218ENST00000518689 FCGRTP55899 365 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
VEGFA-218ENST00000518689 PRKCZQ05513 592 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 SDR42E1Q8WUS8 393 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 DCP1AQ9NPI6 582 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-218ENST00000518689 PNMA3Q9UL41 463 aa14.98□□□□□ -0.01
VEGFA-218ENST00000518689 C19orf81C9J6K1 198 aa14.97□□□□□ -0.01
VEGFA-218ENST00000518689 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.016e-13■■■■■ 112.3
VEGFA-218ENST00000518689 FAM110CQ1W6H9 321 aa14.97□□□□□ -0.01
VEGFA-218ENST00000518689 CERKLQ49MI3 558 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-218ENST00000518689 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
VEGFA-218ENST00000518689 EMILIN3Q9NT22 766 aa14.97□□□□□ -0.01
VEGFA-218ENST00000518689 ECHDC1Q9NTX5 307 aa14.97□□□□□ -0.01
VEGFA-218ENST00000518689 PRKAB2O43741 272 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 MBD4O95243 580 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-218ENST00000518689 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-218ENST00000518689 GRK4P32298 578 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 GUCY1A2P33402 732 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 GCLCP48506 637 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-218ENST00000518689 UBE3CQ15386 1083 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 MTFR1Q15390 333 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 RAET1EQ8TD07 263 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 P2RX7Q99572 595 aaKnown RBP14.96□□□□□ -0.01
VEGFA-218ENST00000518689 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.96□□□□□ -0.015e-41■□□□□ 9.6
VEGFA-218ENST00000518689 MCM9Q9NXL9 1143 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 TMOD4Q9NZQ9 345 aa14.96□□□□□ -0.01
VEGFA-218ENST00000518689 CYP2D6P10635 497 aa14.95□□□□□ -0.02
VEGFA-218ENST00000518689 FLT3LGP49771 235 aa14.95□□□□□ -0.02
VEGFA-218ENST00000518689 ABCB5Q2M3G0 1257 aa14.95□□□□□ -0.02
VEGFA-218ENST00000518689 POTEEQ6S8J3 1075 aa14.95□□□□□ -0.02
VEGFA-218ENST00000518689 MORF4L1Q9UBU8 362 aa14.95□□□□□ -0.02
VEGFA-218ENST00000518689 RLFQ13129 1914 aa14.95□□□□□ -0.02
VEGFA-218ENST00000518689 SMIM22K7EJ46 135 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 TNPO2O14787 897 aaKnown RBP14.94□□□□□ -0.02
VEGFA-218ENST00000518689 PEX10O60683 326 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 RAB3GAP1Q15042 981 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 ACER1Q8TDN7 264 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 PUS7LQ9H0K6 701 aaKnown RBP14.94□□□□□ -0.02
VEGFA-218ENST00000518689 ATP8A2Q9NTI2 1148 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 PARP14Q460N5 1801 aa14.94□□□□□ -0.02
VEGFA-218ENST00000518689 HERVK_113P62684 666 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 IRX3P78415 501 aaPredicted RBP14.93□□□□□ -0.02
VEGFA-218ENST00000518689 IRF5Q13568 498 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 DYNLL2Q96FJ2 89 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 CRBNQ96SW2 442 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 KIAA1683Q9H0B3 1180 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 TXNRD2Q9NNW7 524 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 RBPJLQ9UBG7 517 aa14.93□□□□□ -0.02
VEGFA-218ENST00000518689 CYP2D7A0A087X1C5 515 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 ADCY3O60266 1144 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 ELNP15502 786 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 SEPT2Q15019 361 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 ZYXQ15942 572 aaKnown RBP14.92□□□□□ -0.02
VEGFA-218ENST00000518689 C12orf60Q5U649 245 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 ZSCAN25Q6NSZ9 544 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
VEGFA-218ENST00000518689 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms