RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 INTS3Q68E01 1043 aaKnown RBP4.79□□□□□ -1.64
SKP1-203ENST00000517625 ZNF746Q6NUN9 644 aaPredicted RBP4.79□□□□□ -1.64
SKP1-203ENST00000517625 CDPF1Q6NVV7 123 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 GK5Q6ZS86 529 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 BEND4Q6ZU67 534 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.79□□□□□ -1.64
SKP1-203ENST00000517625 MFSD2AQ8NA29 543 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 COX4I2Q96KJ9 171 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 HIRIP3Q9BW71 556 aaPredicted RBP4.79□□□□□ -1.64
SKP1-203ENST00000517625 FOXQ1Q9C009 403 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 SSU72Q9NP77 194 aaKnown RBP4.79□□□□□ -1.64
SKP1-203ENST00000517625 RAXQ9Y2V3 346 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 SLC12A7Q9Y666 1083 aa4.79□□□□□ -1.64
SKP1-203ENST00000517625 RXRBP28702 533 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 SLBPQ14493 270 aaKnown RBP eCLIP4.78□□□□□ -1.64
SKP1-203ENST00000517625 SEZ6L2Q6UXD5 910 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 PRR23CQ6ZRP0 262 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 FBLIM1Q8WUP2 373 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 TP53INP1Q96A56 240 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 ACSF2Q96CM8 615 aaPredicted RBP4.78□□□□□ -1.64
SKP1-203ENST00000517625 SHDQ96IW2 340 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 CNNM2Q9H8M5 875 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 TJP2Q9UDY2 1190 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 DAGLAQ9Y4D2 1042 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 CORINQ9Y5Q5 1042 aa4.78□□□□□ -1.64
SKP1-203ENST00000517625 MSTNO14793 375 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 TNFRSF10CO14798 259 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 STK10O94804 968 aaKnown RBP4.77□□□□□ -1.65
SKP1-203ENST00000517625 ITGB2P05107 769 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 NFICP08651 508 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 CYP27A1Q02318 531 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 OVOS1Q6IE37 1185 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 ARMCX6Q7L4S7 300 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 NLRC3Q7RTR2 1065 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 LSRQ86X29 649 aaPredicted RBP4.77□□□□□ -1.65
SKP1-203ENST00000517625 FAM13CQ8NE31 585 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 PSMG3-AS1Q96PY0 264 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 KCNF1Q9H3M0 494 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 FBRSQ9HAH7 460 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 TPSG1Q9NRR2 321 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 STOML1Q9UBI4 398 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 PRKAG3Q9UGI9 489 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 PPT2Q9UMR5 302 aa4.77□□□□□ -1.65
SKP1-203ENST00000517625 SLC22A31A6NKX4 558 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 PROCP04070 461 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 NME1P15531 152 aaKnown RBP4.76□□□□□ -1.65
SKP1-203ENST00000517625 RAG1P15918 1043 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 GUCY2CP25092 1073 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 CASP7P55210 303 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 PRAMEF13Q5VWM6 474 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 RNF43Q68DV7 783 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 CKAP2LQ8IYA6 745 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 ATG4CQ96DT6 458 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 CCDC74BQ96LY2 380 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 DBNDD2Q9BQY9 259 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 METTL22Q9BUU2 404 aaPredicted RBP4.76□□□□□ -1.65
SKP1-203ENST00000517625 C7orf69Q9H7B7 122 aa4.76□□□□□ -1.65
SKP1-203ENST00000517625 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 RGS13O14921 159 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 ETV3P41162 512 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 RBL2Q08999 1139 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 NFKBIBQ15653 356 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 NKG7Q16617 165 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 CYP27C1Q4G0S4 372 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 FBXW10Q5XX13 1052 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 CCDC81Q6ZN84 652 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 C22orf34Q6ZV56 151 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 ZAR1Q86SH2 424 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 SMARCC1Q92922 1105 aaPredicted RBP4.75□□□□□ -1.65
SKP1-203ENST00000517625 DHRS1Q96LJ7 313 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 SPOCK3Q9BQ16 436 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.75□□□□□ -1.65
SKP1-203ENST00000517625 ZNF408Q9H9D4 720 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 PRDM10Q9NQV6 1147 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 C1GALT1Q9NS00 363 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 KLHL3Q9UH77 587 aa4.75□□□□□ -1.65
SKP1-203ENST00000517625 CYP7A1P22680 504 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 RNF4P78317 190 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 NFIAQ12857 509 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 BBS9Q3SYG4 887 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 ARSHQ5FYA8 562 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 NKAPLQ5M9Q1 402 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 UBE3DQ7Z6J8 389 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 PHACTR4Q8IZ21 702 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 ANAPC16Q96DE5 110 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 PHAXQ9H814 394 aaKnown RBP4.74□□□□□ -1.65
SKP1-203ENST00000517625 ACTR10Q9NZ32 417 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 MAPK8IP1Q9UQF2 711 aa4.74□□□□□ -1.65
SKP1-203ENST00000517625 R3HCC1Q9Y3T6 440 aaKnown RBP4.74□□□□□ -1.65
SKP1-203ENST00000517625 HMX2A2RU54 273 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 CHURC1-FNTBB4DL54 471 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 IGF2BP3O00425 579 aaKnown RBP eCLIP4.73□□□□□ -1.65
SKP1-203ENST00000517625 DNAJA2O60884 412 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 IGLV1-40P01703 118 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 GTF2F1P35269 517 aaKnown RBP eCLIP4.73□□□□□ -1.65
SKP1-203ENST00000517625 CHMP4BP1P59074 171 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 LETMD1Q6P1Q0 360 aa4.73□□□□□ -1.65
SKP1-203ENST00000517625 OGFOD3Q6PK18 319 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms