RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
CLN8-202ENST00000517514 IGKV6D-41A0A0C4DH26 115 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 PPP1R12BO60237 982 aaPredicted RBP11.73□□□□□ -0.53
CLN8-202ENST00000517514 GJA5P36382 358 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 ANTXR2P58335 489 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 VGLL4Q14135 290 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 NOL9Q5SY16 702 aaKnown RBP11.73□□□□□ -0.53
CLN8-202ENST00000517514 CYB5R4Q7L1T6 521 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
CLN8-202ENST00000517514 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 PLIN4Q96Q06 1357 aa11.73□□□□□ -0.53
CLN8-202ENST00000517514 B4E1Z4 1266 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 GH2P01242 217 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 NF2P35240 595 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 NOVP48745 357 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 FKBP1BP68106 108 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 PDE4BQ07343 736 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
CLN8-202ENST00000517514 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 SAPCD2Q86UD0 394 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 HOOK2Q96ED9 719 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 IL17RBQ9NRM6 502 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
CLN8-202ENST00000517514 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 NMT2O60551 498 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
CLN8-202ENST00000517514 CPA1P15085 419 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 IREB2P48200 963 aaKnown RBP11.71□□□□□ -0.53
CLN8-202ENST00000517514 RBM25P49756 843 aaKnown RBP11.71□□□□□ -0.53
CLN8-202ENST00000517514 APLP1P51693 650 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 TFAP4Q01664 338 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 EXOSC10Q01780 885 aaKnown RBP11.71□□□□□ -0.53
CLN8-202ENST00000517514 SEPT2Q15019 361 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 ABCB5Q2M3G0 1257 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 SCYL3Q8IZE3 742 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 MKNK2Q9HBH9 465 aa11.71□□□□□ -0.53
CLN8-202ENST00000517514 A0A1W2PRG0 241 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 KDM4AO75164 1064 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 SLC3A2P08195 630 aaKnown RBP11.7□□□□□ -0.54
CLN8-202ENST00000517514 PCP11498 1178 aaKnown RBP11.7□□□□□ -0.54
CLN8-202ENST00000517514 PTPRAP18433 802 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 HUNKP57058 714 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 HTRA3P83110 453 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
CLN8-202ENST00000517514 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
CLN8-202ENST00000517514 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 RNF41Q9H4P4 317 aaPredicted RBP11.7□□□□□ -0.54
CLN8-202ENST00000517514 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
CLN8-202ENST00000517514 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
CLN8-202ENST00000517514 LOC285556D6RIA3 1793 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 UNCXA6NJT0 531 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 FAM155AB1AL88 458 aaPredicted RBP11.69□□□□□ -0.54
CLN8-202ENST00000517514 RANBP6O60518 1105 aaKnown RBP11.69□□□□□ -0.54
CLN8-202ENST00000517514 SEC23AQ15436 765 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 CHST3Q7LGC8 479 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 ZNF444Q8N0Y2 327 aaPredicted RBP11.69□□□□□ -0.54
CLN8-202ENST00000517514 ACER1Q8TDN7 264 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 JAKMIP1Q96N16 626 aaKnown RBP11.69□□□□□ -0.54
CLN8-202ENST00000517514 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 ZKSCAN3Q9BRR0 538 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 TRIM34Q9BYJ4 488 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 C22orf23Q9BZE7 217 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 TCP11L1Q9NUJ3 509 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 CEP350Q5VT06 3117 aa11.69□□□□□ -0.54
CLN8-202ENST00000517514 PARP14Q460N5 1801 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 SPDYE5A6NIY4 337 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 ASNSP08243 561 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 TSPY3P0CV98 308 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 TSPY8P0CW00 308 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 ANAPC15P60006 121 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 C1QTNF8P60827 252 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 DGKZQ13574 1117 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 ESR2Q92731 530 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 WNK4Q96J92 1243 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 KRT23Q9C075 422 aa11.68□□□□□ -0.54
CLN8-202ENST00000517514 CNNM2Q9H8M5 875 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms