RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ARP10275 920 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 NDUFV2P19404 249 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 FBLN1P23142 703 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 CLCN5P51795 746 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 IRX5P78411 483 aaPredicted RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 SRSF11Q05519 484 aaKnown RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 MAPK8IP2Q13387 824 aaPredicted RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 PTPN21Q16825 1174 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 C1orf53Q5VUE5 145 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 ZFPM1Q8IX07 1006 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 DTWD2Q8NBA8 298 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 NFATC2IPQ8NCF5 419 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 SP7Q8TDD2 431 aaPredicted RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 PABPC5Q96DU9 382 aaKnown RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 ZNF496Q96IT1 587 aaPredicted RBP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 FMNL2Q96PY5 1086 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 GMLQ99445 158 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 WASF3Q9UPY6 502 aa4.61□□□□□ -1.67
SCARNA13-201ENST00000516672 SCN9AQ15858 1988 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 FAM205CA6NFA0 338 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 SPDYE5A6NIY4 337 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 ATXN7O15265 892 aaPredicted RBP4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 PQBP1O60828 265 aaKnown RBP4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 SEC24BO95487 1268 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 TOP3BO95985 862 aaKnown RBP4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 FGBP02675 491 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 CBX2Q14781 532 aaPredicted RBP4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 OTOP2Q7RTS6 562 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 POTEDQ86YR6 584 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 RIN2Q8WYP3 895 aaPredicted RBP4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 LPAR1Q92633 364 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 FERMT2Q96AC1 680 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 MFSD1Q9H3U5 465 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 GJD2Q9UKL4 321 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 NIP7Q9Y221 180 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 SLC4A7Q9Y6M7 1214 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 AK9Q5TCS8 1911 aa4.6□□□□□ -1.67
SCARNA13-201ENST00000516672 AKAP13Q12802 2813 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 A0A1B0GUL7 405 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 KBTBD13C9JR72 458 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 PI15O43692 258 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 KINO60870 393 aaKnown RBP4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 ATP2A2P16615 1042 aaKnown RBP4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 CYP2B6P20813 491 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 ICAM3P32942 547 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 ADCYAP1R1P41586 468 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 FAAP100Q0VG06 881 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 SERINC3Q13530 473 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 IL31Q6EBC2 164 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 POTEHQ6S545 545 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 TMEM199Q8N511 208 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 FAM181AQ8N9Y4 354 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 MAP4K1Q92918 833 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 CLDND1Q9NY35 253 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 PPP2R3BQ9Y5P8 575 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 CSADQ9Y600 493 aa4.59□□□□□ -1.67
SCARNA13-201ENST00000516672 TLN1Q9Y490 2541 aaKnown RBP4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 FBN1P35555 2871 aaKnown RBP4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 DCDC2CA8MYV0 355 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 MAP3K9P80192 1104 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 TROAPQ12815 778 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 CWF19L1Q69YN2 538 aaKnown RBP4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 ZBTB33Q86T24 672 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 DZIP3Q86Y13 1208 aaKnown RBP4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 SCNM1Q9BWG6 230 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 SGPP1Q9BX95 441 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 IL23AQ9NPF7 189 aa4.58□□□□□ -1.68
SCARNA13-201ENST00000516672 ABCC4O15439 1325 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 LOC105371045A0A1W2PR82 267 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 CLRN2A0PK11 232 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 ZBBXA8MT70 800 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 GDF9O60383 454 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 KCNK5O95279 499 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 MYCNP04198 464 aaPredicted RBP4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 HSP90AB1P08238 724 aaKnown RBP4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 SP9P0CG40 484 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 AOC1P19801 751 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 LTBRP36941 435 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 IL6STP40189 918 aaPredicted RBP4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 CSRP3P50461 194 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 PPIL2Q13356 520 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 SMAD4Q13485 552 aaKnown RBP4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 CLEC4GQ6UXB4 293 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 C3orf67Q6ZVT6 689 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 ERO1BQ86YB8 467 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 FLCNQ8NFG4 579 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 NXF1Q9UBU9 619 aaKnown RBP4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 DDX20Q9UHI6 824 aaKnown RBP4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 SNCAIPQ9Y6H5 919 aa4.57□□□□□ -1.68
SCARNA13-201ENST00000516672 SPENQ96T58 3664 aaKnown RBP4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 C6orf229H3BNL8 230 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 ZKSCAN1P17029 563 aaPredicted RBP4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 SPEM2Q0P670 501 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 MOGSQ13724 837 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 LY6DQ14210 128 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 COL19A1Q14993 1142 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 KANK3Q6NY19 840 aa4.56□□□□□ -1.68
SCARNA13-201ENST00000516672 NFXL1Q6ZNB6 911 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms