RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 RNGTTO60942 597 aaKnown RBP1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 PLA2G1BP04054 148 aaKnown RBP1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 ZGLP1P0C6A0 271 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 HCLS1P14317 486 aaPredicted RBP1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 TTLL4Q14679 1199 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 UBE2FQ969M7 185 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 WWC2-AS2Q96NR7 200 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 FANCD2OSQ96PS1 177 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 FOXQ1Q9C009 403 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 DEF6Q9H4E7 631 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 PCDHA5Q9Y5H7 936 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 ST14Q9Y5Y6 855 aa1.34□□□□□ -2.19
RNU6-539P-201ENST00000516665 ZNF536O15090 1300 aa1.34□□□□□ -2.2
RNU6-539P-201ENST00000516665 EFEMP2O95967 443 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 SELENOPP49908 381 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 POU4F3Q15319 338 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 NR0B2Q15466 257 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 CRELD2Q6UXH1 353 aaPredicted RBP1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 GAREM2Q75VX8 874 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 STAG2Q8N3U4 1231 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 OXR1Q8N573 874 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZNF366Q8N895 744 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 FNIP1Q8TF40 1166 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 BSNDQ8WZ55 320 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 CSRNP2Q9H175 543 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 DZANK1Q9NVP4 752 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 KANSL3Q9P2N6 904 aa1.33□□□□□ -2.2
RNU6-539P-201ENST00000516665 SH3D21A4FU49 640 aa1.32□□□□□ -2.2
RNU6-539P-201ENST00000516665 DGCR2P98153 550 aa1.32□□□□□ -2.2
RNU6-539P-201ENST00000516665 PPP1R10Q96QC0 940 aaKnown RBP1.32□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZSWIM5Q9P217 1185 aa1.32□□□□□ -2.2
RNU6-539P-201ENST00000516665 PCOLCE2Q9UKZ9 415 aa1.32□□□□□ -2.2
RNU6-539P-201ENST00000516665 INVSQ9Y283 1065 aa1.32□□□□□ -2.2
RNU6-539P-201ENST00000516665 NOTCH3Q9UM47 2321 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 EOMESO95936 686 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 NEFMP07197 916 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 KRTAP10-8P60410 259 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 YBX1P67809 324 aaKnown RBP1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 DLX2Q07687 328 aaPredicted RBP1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 HP1BP3Q5SSJ5 553 aaPredicted RBP1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 RNF207Q6ZRF8 634 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 THAP5Q7Z6K1 395 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 SAPCD2Q86UD0 394 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 CARFQ8N187 725 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 NLGN1Q8N2Q7 840 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 TSEN2Q8NCE0 465 aaKnown RBP1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 DNERQ8NFT8 737 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 LARP4BQ92615 738 aaKnown RBP1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 ATXN3LQ9H3M9 355 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 PRDM10Q9NQV6 1147 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 PRDM5Q9NQX1 630 aaPredicted RBP1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 TSHZ2Q9NRE2 1034 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 DISC1Q9NRI5 854 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 KIAA1024Q9UPX6 916 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 TESMINQ9Y4I5 508 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 ATAD2Q6PL18 1390 aa1.31□□□□□ -2.2
RNU6-539P-201ENST00000516665 WASH4PA8MWX3 477 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 IGFBP6P24592 240 aaPredicted RBP1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 ADRA1BP35368 520 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZNF76P36508 570 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 RFC5P40937 340 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 PTH1RQ03431 593 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 SNX17Q15036 470 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 LSM12Q3MHD2 195 aaKnown RBP1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 TTC39BQ5VTQ0 682 aaPredicted RBP1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 SYCE2Q6PIF2 218 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZNF627Q7L945 461 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 TMC6Q7Z403 805 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZNF761Q86XN6 746 aaPredicted RBP1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 MFSD4AQ8N468 514 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 TPCN2Q8NHX9 752 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 GAS2L2Q8NHY3 880 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 SCG3Q8WXD2 468 aaKnown RBP1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 ISL2Q96A47 359 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 WDR89Q96FK6 387 aaPredicted RBP1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 ADGRE3Q9BY15 652 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 TCAF1Q9Y4C2 921 aa1.3□□□□□ -2.2
RNU6-539P-201ENST00000516665 UBAP1LF5GYI3 381 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 GPR42O15529 346 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 CYP11A1P05108 521 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 MSL3P1P0C860 447 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 FGD1P98174 961 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 FAM69CQ0P6D2 419 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 PDE3AQ14432 1141 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 KRTAP5-5Q701N2 237 aaPredicted RBP1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 TMEM102Q8N9M5 508 aaPredicted RBP1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 SCARB1Q8WTV0 552 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 QTRT2Q9H974 415 aaKnown RBP1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 PPP4R1LQ9P1A2 415 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 MAPK8IP1Q9UQF2 711 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 NOD1Q9Y239 953 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 CAPN6Q9Y6Q1 641 aa1.29□□□□□ -2.2
RNU6-539P-201ENST00000516665 NOTOA8MTQ0 251 aa1.28□□□□□ -2.2
RNU6-539P-201ENST00000516665 RAMP2O60895 175 aa1.28□□□□□ -2.2
RNU6-539P-201ENST00000516665 ZFP36P26651 326 aaKnown RBP1.28□□□□□ -2.2
RNU6-539P-201ENST00000516665 ID3Q02535 119 aa1.28□□□□□ -2.2
RNU6-539P-201ENST00000516665 SCRN1Q12765 414 aa1.28□□□□□ -2.2
RNU6-539P-201ENST00000516665 SKIV2LQ15477 1246 aaKnown RBP1.28□□□□□ -2.2
RNU6-539P-201ENST00000516665 NLRX1Q86UT6 975 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms