RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 MIR1-1HGQ9H1L0 117 aa8.12□□□□□ -1.11
RUFY3-215ENST00000515479 PRR33A8MZF0 331 aa8.11□□□□□ -1.11
RUFY3-215ENST00000515479 CDKAL1Q5VV42 579 aa8.11□□□□□ -1.11
RUFY3-215ENST00000515479 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
RUFY3-215ENST00000515479 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
RUFY3-215ENST00000515479 GFRA2O00451 464 aa8.1□□□□□ -1.11
RUFY3-215ENST00000515479 CST3P01034 146 aaPredicted RBP8.1□□□□□ -1.11
RUFY3-215ENST00000515479 TFE3P19532 575 aaPredicted RBP8.1□□□□□ -1.11
RUFY3-215ENST00000515479 DAB2P98082 770 aa8.1□□□□□ -1.11
RUFY3-215ENST00000515479 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
RUFY3-215ENST00000515479 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
RUFY3-215ENST00000515479 HSPA12BQ96MM6 686 aa8.1□□□□□ -1.11
RUFY3-215ENST00000515479 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
RUFY3-215ENST00000515479 PGRP06401 933 aa8.09□□□□□ -1.11
RUFY3-215ENST00000515479 ZNF865P0CJ78 1059 aaPredicted RBP8.09□□□□□ -1.11
RUFY3-215ENST00000515479 C22orf34Q6ZV56 151 aa8.09□□□□□ -1.11
RUFY3-215ENST00000515479 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
RUFY3-215ENST00000515479 DPH2Q9BQC3 489 aaPredicted RBP8.09□□□□□ -1.11
RUFY3-215ENST00000515479 TLR6Q9Y2C9 796 aa8.09□□□□□ -1.11
RUFY3-215ENST00000515479 TACC3Q9Y6A5 838 aa8.09□□□□□ -1.11
RUFY3-215ENST00000515479 H3BS24 57 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 CBX7O95931 251 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 C8AP07357 584 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 RLBP1P12271 317 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 TAF1CQ15572 869 aaPredicted RBP8.08□□□□□ -1.12
RUFY3-215ENST00000515479 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
RUFY3-215ENST00000515479 FLAD1Q8NFF5 587 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 JARID2Q92833 1246 aaPredicted RBP8.08□□□□□ -1.12
RUFY3-215ENST00000515479 FAM161BQ96MY7 647 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 CARS2Q9HA77 564 aaKnown RBP8.08□□□□□ -1.12
RUFY3-215ENST00000515479 ATP13A1Q9HD20 1204 aa8.08□□□□□ -1.12
RUFY3-215ENST00000515479 CYP7A1P22680 504 aa8.07□□□□□ -1.12
RUFY3-215ENST00000515479 NOC4LQ9BVI4 516 aaKnown RBP8.07□□□□□ -1.12
RUFY3-215ENST00000515479 KRTAP9-9Q9BYP9 154 aa8.07□□□□□ -1.12
RUFY3-215ENST00000515479 KRTAP9-4Q9BYQ2 154 aa8.07□□□□□ -1.12
RUFY3-215ENST00000515479 SEMA3GQ9NS98 782 aa8.07□□□□□ -1.12
RUFY3-215ENST00000515479 TJP2Q9UDY2 1190 aa8.07□□□□□ -1.12
RUFY3-215ENST00000515479 CAPN6Q9Y6Q1 641 aa8.07□□□□□ -1.12
RUFY3-215ENST00000515479 ST13P50502 369 aaKnown RBP8.06□□□□□ -1.12
RUFY3-215ENST00000515479 RPL6Q02878 288 aaKnown RBP8.06□□□□□ -1.12
RUFY3-215ENST00000515479 PDE4BQ07343 736 aa8.06□□□□□ -1.12
RUFY3-215ENST00000515479 ZNF648Q5T619 568 aaPredicted RBP8.06□□□□□ -1.12
RUFY3-215ENST00000515479 DIEXFQ68CQ4 756 aaKnown RBP8.06□□□□□ -1.12
RUFY3-215ENST00000515479 TMC4Q7Z404 712 aa8.06□□□□□ -1.12
RUFY3-215ENST00000515479 CDH24Q86UP0 819 aa8.06□□□□□ -1.12
RUFY3-215ENST00000515479 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
RUFY3-215ENST00000515479 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
RUFY3-215ENST00000515479 TMEM87BQ96K49 555 aa8.06□□□□□ -1.12
RUFY3-215ENST00000515479 LMCD1Q9NZU5 365 aa8.06□□□□□ -1.12
RUFY3-215ENST00000515479 CTSHP09668 335 aa8.05□□□□□ -1.12
RUFY3-215ENST00000515479 ZSWIM9Q86XI8 627 aa8.05□□□□□ -1.12
RUFY3-215ENST00000515479 PHC3Q8NDX5 983 aa8.05□□□□□ -1.12
RUFY3-215ENST00000515479 COX4I2Q96KJ9 171 aa8.05□□□□□ -1.12
RUFY3-215ENST00000515479 CTNND2Q9UQB3 1225 aa8.05□□□□□ -1.12
RUFY3-215ENST00000515479 ST14Q9Y5Y6 855 aa8.05□□□□□ -1.12
RUFY3-215ENST00000515479 F6X3S4 739 aa8.04□□□□□ -1.12
RUFY3-215ENST00000515479 KIR3DL1P43629 444 aa8.04□□□□□ -1.12
RUFY3-215ENST00000515479 KCNMB1Q16558 191 aa8.04□□□□□ -1.12
RUFY3-215ENST00000515479 SLC6A19Q695T7 634 aa8.04□□□□□ -1.12
RUFY3-215ENST00000515479 FBXO33Q7Z6M2 555 aa8.04□□□□□ -1.12
RUFY3-215ENST00000515479 CRELD1Q96HD1 420 aa8.04□□□□□ -1.12
RUFY3-215ENST00000515479 BPNT1O95861 308 aa8.03□□□□□ -1.12
RUFY3-215ENST00000515479 THAP5Q7Z6K1 395 aa8.03□□□□□ -1.12
RUFY3-215ENST00000515479 ACSF2Q96CM8 615 aaPredicted RBP8.03□□□□□ -1.12
RUFY3-215ENST00000515479 MRS2Q9HD23 443 aa8.03□□□□□ -1.12
RUFY3-215ENST00000515479 ZSWIM5Q9P217 1185 aa8.03□□□□□ -1.12
RUFY3-215ENST00000515479 ADAM30Q9UKF2 790 aa8.03□□□□□ -1.12
RUFY3-215ENST00000515479 USP31Q70CQ4 1352 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 RBAK-RBAKDNI3L0D1 243 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 SORBS3O60504 671 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 FARP2O94887 1054 aaPredicted RBP8.02□□□□□ -1.13
RUFY3-215ENST00000515479 ETV3P41162 512 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 TNK2Q07912 1038 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 FZD5Q13467 585 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 BNC2Q6ZN30 1099 aaPredicted RBP8.02□□□□□ -1.13
RUFY3-215ENST00000515479 MCATQ8IVS2 390 aaKnown RBP8.02□□□□□ -1.13
RUFY3-215ENST00000515479 UBE2FQ969M7 185 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 VTI1BQ9UEU0 232 aa8.02□□□□□ -1.13
RUFY3-215ENST00000515479 RB1CC1Q8TDY2 1594 aa8.01□□□□□ -1.13
RUFY3-215ENST00000515479 PLCG1P19174 1290 aa8.01□□□□□ -1.13
RUFY3-215ENST00000515479 AFMP43652 599 aa8.01□□□□□ -1.13
RUFY3-215ENST00000515479 CORINQ9Y5Q5 1042 aa8.01□□□□□ -1.13
RUFY3-215ENST00000515479 LRRC10BA6NIK2 292 aa8□□□□□ -1.13
RUFY3-215ENST00000515479 JAG1P78504 1218 aa8□□□□□ -1.13
RUFY3-215ENST00000515479 LMNB2Q03252 620 aa8□□□□□ -1.13
RUFY3-215ENST00000515479 CAMK2GQ13555 558 aaPredicted RBP8□□□□□ -1.13
RUFY3-215ENST00000515479 FYB2Q5VWT5 728 aa8□□□□□ -1.13
RUFY3-215ENST00000515479 CCDC84Q86UT8 332 aaPredicted RBP8□□□□□ -1.13
RUFY3-215ENST00000515479 FAM13CQ8NE31 585 aa8□□□□□ -1.13
RUFY3-215ENST00000515479 DNAJB8Q8NHS0 232 aa8□□□□□ -1.13
RUFY3-215ENST00000515479 CILPO75339 1184 aa7.99□□□□□ -1.13
RUFY3-215ENST00000515479 PF4P02776 101 aa7.99□□□□□ -1.13
RUFY3-215ENST00000515479 TAGLNQ01995 201 aaKnown RBP7.99□□□□□ -1.13
RUFY3-215ENST00000515479 ZNF124Q15973 351 aa7.99□□□□□ -1.13
RUFY3-215ENST00000515479 PKN1Q16512 942 aa7.99□□□□□ -1.13
RUFY3-215ENST00000515479 KSR1Q8IVT5 923 aa7.99□□□□□ -1.13
RUFY3-215ENST00000515479 PIWIL2Q8TC59 973 aaKnown RBP7.99□□□□□ -1.13
RUFY3-215ENST00000515479 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
RUFY3-215ENST00000515479 ALPK1Q96QP1 1244 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms