RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZNF280CQ8ND82 737 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 SDR42E1Q8WUS8 393 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
CLCN3-210ENST00000515420 PUS7LQ9H0K6 701 aaKnown RBP15.38■□□□□ 0.05
CLCN3-210ENST00000515420 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 IGHDP01880 384 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 PLCD1P51178 756 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 NUCB1Q02818 461 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 SLFNL1Q499Z3 407 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 SH3D19Q5HYK7 790 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 GIMAP6Q6P9H5 292 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 PARK7Q99497 189 aaKnown RBP15.37■□□□□ 0.05
CLCN3-210ENST00000515420 ZBTB21Q9ULJ3 1066 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 ADGRA2Q96PE1 1338 aa15.37■□□□□ 0.05
CLCN3-210ENST00000515420 CHGBP05060 677 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 GNAT2P19087 354 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 SPP2Q13103 211 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 ARHGEF6Q15052 776 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 SLC4A8Q2Y0W8 1093 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 OSBP2Q969R2 916 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 EVI5LQ96CN4 794 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 STRBPQ96SI9 672 aaKnown RBP15.36■□□□□ 0.05
CLCN3-210ENST00000515420 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
CLCN3-210ENST00000515420 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 AGTPBP1Q9UPW5 1226 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 SLC4A4Q9Y6R1 1079 aa15.36■□□□□ 0.05
CLCN3-210ENST00000515420 C19orf81C9J6K1 198 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 PRKAB2O43741 272 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 GDF11O95390 407 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 SHMT1P34896 483 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 CERKLQ49MI3 558 aaPredicted RBP15.35■□□□□ 0.05
CLCN3-210ENST00000515420 GADL1Q6ZQY3 521 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 CCDC84Q86UT8 332 aaPredicted RBP15.35■□□□□ 0.05
CLCN3-210ENST00000515420 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
CLCN3-210ENST00000515420 ARPP21Q9UBL0 812 aaPredicted RBP15.35■□□□□ 0.05
CLCN3-210ENST00000515420 USP17L10C9JJH3 530 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 BACE1P56817 501 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 JAG1P78504 1218 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 PABPC4Q13310 644 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLCN3-210ENST00000515420 ABCB5Q2M3G0 1257 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 ZMYM1Q5SVZ6 1142 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
CLCN3-210ENST00000515420 C17orf99Q6UX52 265 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 CABP5Q9NP86 173 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
CLCN3-210ENST00000515420 USP17L12C9JPN9 530 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 USP17L21D6R901 530 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 GPAA1O43292 621 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 GNRH1P01148 92 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 GH2P01242 217 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 HMGCS2P54868 508 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 KIF22Q14807 665 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 OTOP1Q7RTM1 612 aa15.33■□□□□ 0.04
CLCN3-210ENST00000515420 GSG1L2A8MUP6 293 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
CLCN3-210ENST00000515420 MTMR2Q13614 643 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 CTR9Q6PD62 1173 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 C16orf86Q6ZW13 317 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 PLEKHM2Q8IWE5 1019 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 CD99L2Q8TCZ2 262 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 CCDC17Q96LX7 622 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 EFCC1Q9HA90 598 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 TMOD4Q9NZQ9 345 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 ROBO3Q96MS0 1386 aa15.32■□□□□ 0.04
CLCN3-210ENST00000515420 M0R2C6 588 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 CYP2D6P10635 497 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 BCRP11274 1271 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
CLCN3-210ENST00000515420 USP14P54578 494 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
CLCN3-210ENST00000515420 TMEM179Q6ZVK1 233 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 HTTP42858 3142 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 MGAMO43451 1857 aa15.31■□□□□ 0.04
CLCN3-210ENST00000515420 PATL2C9JE40 543 aaKnown RBP15.3■□□□□ 0.04
CLCN3-210ENST00000515420 CYP2C8P10632 490 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 CDK8P49336 464 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 IRX6P78412 446 aaPredicted RBP15.3■□□□□ 0.04
CLCN3-210ENST00000515420 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
CLCN3-210ENST00000515420 NACAP1Q9BZK3 213 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 GREB1LQ9C091 1923 aaPredicted RBP15.3■□□□□ 0.04
CLCN3-210ENST00000515420 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 CPA4Q9UI42 421 aa15.3■□□□□ 0.04
CLCN3-210ENST00000515420 OSBPP22059 807 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
CLCN3-210ENST00000515420 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms