RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 CSRNP1Q96S65 589 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 ZNF341Q9BYN7 854 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 ARMT1Q9H993 441 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 GBA2Q9HCG7 927 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 DCP1AQ9NPI6 582 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 DDX4Q9NQI0 724 aaKnown RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 ARPP21Q9UBL0 812 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 ZNF112Q9UJU3 913 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 TLL2Q9Y6L7 1015 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 SLC4A4Q9Y6R1 1079 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 PAPPA2Q9BXP8 1791 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 RASSF10A6NK89 507 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 CHMLP26374 656 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 PSEN2P49810 448 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 TCP10Q12799 353 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 NMIQ13287 307 aaPredicted RBP8.48□□□□□ -1.05
SMAD1-213ENST00000514778 SH3BP5LQ7L8J4 393 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 MAPKAPK5Q8IW41 473 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 ZFPM1Q8IX07 1006 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 ANKRD13AQ8IZ07 590 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 MCM9Q9NXL9 1143 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 SWAP70Q9UH65 585 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
SMAD1-213ENST00000514778 A0A0D9SFI3 127 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 DDTLA6NHG4 134 aaPredicted RBP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 M0R2C6 588 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 CTNND1O60716 968 aaKnown RBP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 USP2O75604 605 aaPredicted RBP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 POLR3DP05423 398 aaPredicted RBP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 MAP3K9P80192 1104 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 C12orf60Q5U649 245 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 TATDN1Q6P1N9 297 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 CWC27Q6UX04 472 aaKnown RBP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 IFNL3Q8IZI9 196 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 ZNF454Q8N9F8 522 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
SMAD1-213ENST00000514778 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 FAM227BQ96M60 508 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 SERPINB13Q9UIV8 391 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 SSC5DA1L4H1 1573 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 FOCADQ5VW36 1801 aa8.47□□□□□ -1.05
SMAD1-213ENST00000514778 MYH7P12883 1935 aa8.46□□□□□ -1.05
SMAD1-213ENST00000514778 PHF20L1A8MW92 1017 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 SGSM2O43147 1006 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 EPB41L2O43491 1005 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 CDC45O75419 566 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 CHGBP05060 677 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 APPP05067 770 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 SLC3A2P08195 630 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 HSPD1P10809 573 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 PCP11498 1178 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 ECE1P42892 770 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 FOSBP53539 338 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 HUNKP57058 714 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 GABPAQ06546 454 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 TTLL12Q14166 644 aaPredicted RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 DEFB115Q30KQ5 88 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 SLFNL1Q499Z3 407 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 NOL9Q5SY16 702 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 PRAMEF18Q5VWM3 479 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 RGMBQ6NW40 437 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 CTR9Q6PD62 1173 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 CRACR2BQ8N4Y2 399 aaPredicted RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 SEC62Q99442 399 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 DSCC1Q9BVC3 393 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 NAPBQ9H115 298 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 ZNF408Q9H9D4 720 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 CTNNA3Q9UI47 895 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 ANAPC4Q9UJX5 808 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 ABT1Q9ULW3 272 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 SCAF8Q9UPN6 1271 aaKnown RBP8.46□□□□□ -1.06
SMAD1-213ENST00000514778 CSADQ9Y600 493 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 ROBO3Q96MS0 1386 aa8.46□□□□□ -1.06
SMAD1-213ENST00000514778 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
SMAD1-213ENST00000514778 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 USP17L21D6R901 530 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 HRO43593 1189 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 PRKAB2O43741 272 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 EVI5O60447 810 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 ZBTB48P10074 688 aaPredicted RBP8.45□□□□□ -1.06
SMAD1-213ENST00000514778 TDO2P48775 406 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 INHBEP58166 350 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 FMR1Q06787 632 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMAD1-213ENST00000514778 DLK2Q6UY11 383 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 SLC10A4Q96EP9 437 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 CCDC17Q96LX7 622 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 WRNIP1Q96S55 665 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 KCNK17Q96T54 332 aa8.45□□□□□ -1.06
SMAD1-213ENST00000514778 DDX60LQ5H9U9 1706 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms