RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SEZ6L2Q6UXD5 910 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 RUFY4Q6ZNE9 571 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 CDC37L1Q7L3B6 337 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 MCATQ8IVS2 390 aaKnown RBP8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 MRPL41Q8IXM3 137 aaKnown RBP8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 TMEM40Q8WWA1 233 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 GMIPQ9P107 970 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 PCOLCE2Q9UKZ9 415 aa8.1□□□□□ -1.11
HMGCS1-207ENST00000514610 RXRBP28702 533 aa8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 CAP2P40123 477 aa8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 PRAMEF13Q5VWM6 474 aa8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 FAM13CQ8NE31 585 aa8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 SSU72Q9NP77 194 aaKnown RBP8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 TPSG1Q9NRR2 321 aa8.09□□□□□ -1.11
HMGCS1-207ENST00000514610 DHX15O43143 795 aaKnown RBP8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 CST3P01034 146 aaPredicted RBP8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 ARSHQ5FYA8 562 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 SLC6A19Q695T7 634 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 ARMCX6Q7L4S7 300 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 KCT2Q8NC54 265 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 KCNF1Q9H3M0 494 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 CNNM2Q9H8M5 875 aa8.08□□□□□ -1.12
HMGCS1-207ENST00000514610 FAM95CA0A1B0GW59 222 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 MSTNO14793 375 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 ACRP10323 421 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 CDCP2Q5VXM1 449 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 SLFN12Q8IYM2 578 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 CRBNQ96SW2 442 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 SPOCK3Q9BQ16 436 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
HMGCS1-207ENST00000514610 RBAK-RBAKDNI3L0D1 243 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 SMAD7O15105 426 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 STK10O94804 968 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 PROCP04070 461 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 NME1P15531 152 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 POLR2BP30876 1174 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 CDK5R2Q13319 367 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 MLECQ14165 292 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 UBXN4Q92575 508 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 ARMC5Q96C12 935 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 FOXQ1Q9C009 403 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 PRKAG3Q9UGI9 489 aa8.06□□□□□ -1.12
HMGCS1-207ENST00000514610 HMX2A2RU54 273 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 LRIG2O94898 1065 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 RBL2Q08999 1139 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 MAP7Q14244 749 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 SHISA5Q8N114 240 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 OR6P1Q8NGX9 317 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 XAGE3Q8WTP9 111 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 SLC9A7Q96T83 725 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 FAM83CQ9BQN1 747 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 TNKS2Q9H2K2 1166 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 C7orf69Q9H7B7 122 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 RAXQ9Y2V3 346 aa8.05□□□□□ -1.12
HMGCS1-207ENST00000514610 TNFRSF10CO14798 259 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 YARSP54577 528 aaKnown RBP8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 DOC2BQ14184 412 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 ZYXQ15942 572 aaKnown RBP8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 PAOXQ6QHF9 649 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 PRR23CQ6ZRP0 262 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 ANKS3Q6ZW76 656 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 HNRNPLLQ8WVV9 542 aaKnown RBP8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 GATA6Q92908 595 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 KIF2CQ99661 725 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 TM9SF2Q99805 663 aa8.04□□□□□ -1.12
HMGCS1-207ENST00000514610 FAM86C2PA6NEL3 165 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 KLF4O43474 513 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 ADAM23O75077 832 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 SLITRK5O94991 958 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 GUCY2CP25092 1073 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 ADMP35318 185 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 TAB3Q8N5C8 712 aaPredicted RBP8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 BAHD1Q8TBE0 780 aaPredicted RBP8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 PPP1R13LQ8WUF5 828 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 CYB5D2Q8WUJ1 264 aa8.03□□□□□ -1.12
HMGCS1-207ENST00000514610 A0A1W2PQH9 124 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 LEFTY1O75610 366 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 UBOX5O94941 541 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 RAG1P15918 1043 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 CASP7P55210 303 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 TOP6BLQ8N6T0 577 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 C19orf47Q8N9M1 422 aaKnown RBP8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 MFSD2AQ8NA29 543 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 DNAJB8Q8NHS0 232 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 RIN3Q8TB24 985 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 MIPEPQ99797 713 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms