RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 FAM155AB1AL88 458 aaPredicted RBP8.3□□□□□ -1.08
SSBP2-217ENST00000513785 FGD1P98174 961 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 SFRP5Q5T4F7 317 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 PRAMEF13Q5VWM6 474 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 FYB2Q5VWT5 728 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 LETMD1Q6P1Q0 360 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSBP2-217ENST00000513785 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
SSBP2-217ENST00000513785 ZNF865P0CJ78 1059 aaPredicted RBP8.29□□□□□ -1.08
SSBP2-217ENST00000513785 RPS26P62854 115 aaKnown RBP8.29□□□□□ -1.08
SSBP2-217ENST00000513785 MEI1Q5TIA1 1274 aa8.29□□□□□ -1.08
SSBP2-217ENST00000513785 AGMOQ6ZNB7 445 aa8.29□□□□□ -1.08
SSBP2-217ENST00000513785 MFSD4AQ8N468 514 aa8.29□□□□□ -1.08
SSBP2-217ENST00000513785 CARS2Q9HA77 564 aaKnown RBP8.29□□□□□ -1.08
SSBP2-217ENST00000513785 ZNF503-AS2A6NEH8 195 aa8.28□□□□□ -1.08
SSBP2-217ENST00000513785 CBX7O95931 251 aa8.28□□□□□ -1.08
SSBP2-217ENST00000513785 CST3P01034 146 aaPredicted RBP8.28□□□□□ -1.08
SSBP2-217ENST00000513785 C22orf34Q6ZV56 151 aa8.28□□□□□ -1.08
SSBP2-217ENST00000513785 LMCD1Q9NZU5 365 aa8.28□□□□□ -1.08
SSBP2-217ENST00000513785 ST14Q9Y5Y6 855 aa8.28□□□□□ -1.08
SSBP2-217ENST00000513785 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
SSBP2-217ENST00000513785 H3BS24 57 aa8.27□□□□□ -1.09
SSBP2-217ENST00000513785 FARP2O94887 1054 aaPredicted RBP8.27□□□□□ -1.09
SSBP2-217ENST00000513785 LIG3P49916 1009 aa8.27□□□□□ -1.09
SSBP2-217ENST00000513785 EAPPQ56P03 285 aaPredicted RBP8.27□□□□□ -1.09
SSBP2-217ENST00000513785 ZSWIM9Q86XI8 627 aa8.27□□□□□ -1.09
SSBP2-217ENST00000513785 DPH2Q9BQC3 489 aaPredicted RBP8.27□□□□□ -1.09
SSBP2-217ENST00000513785 C19orf73Q9NVV2 129 aa8.27□□□□□ -1.09
SSBP2-217ENST00000513785 TJP2Q9UDY2 1190 aa8.27□□□□□ -1.09
SSBP2-217ENST00000513785 TFE3P19532 575 aaPredicted RBP8.26□□□□□ -1.09
SSBP2-217ENST00000513785 LMNB1P20700 586 aa8.26□□□□□ -1.09
SSBP2-217ENST00000513785 CDH24Q86UP0 819 aa8.26□□□□□ -1.09
SSBP2-217ENST00000513785 PATL2C9JE40 543 aaKnown RBP8.25□□□□□ -1.09
SSBP2-217ENST00000513785 MESP2Q0VG99 397 aa8.25□□□□□ -1.09
SSBP2-217ENST00000513785 KCNMB1Q16558 191 aa8.25□□□□□ -1.09
SSBP2-217ENST00000513785 LIN37Q96GY3 246 aaPredicted RBP8.25□□□□□ -1.09
SSBP2-217ENST00000513785 PARP2Q9UGN5 583 aa8.25□□□□□ -1.09
SSBP2-217ENST00000513785 TLR6Q9Y2C9 796 aa8.25□□□□□ -1.09
SSBP2-217ENST00000513785 LRRC10BA6NIK2 292 aa8.24□□□□□ -1.09
SSBP2-217ENST00000513785 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.24□□□□□ -1.09
SSBP2-217ENST00000513785 PGRP06401 933 aa8.24□□□□□ -1.09
SSBP2-217ENST00000513785 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
SSBP2-217ENST00000513785 UBE2FQ969M7 185 aa8.24□□□□□ -1.09
SSBP2-217ENST00000513785 MIR1-1HGQ9H1L0 117 aa8.24□□□□□ -1.09
SSBP2-217ENST00000513785 TNK2Q07912 1038 aa8.23□□□□□ -1.09
SSBP2-217ENST00000513785 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.09
SSBP2-217ENST00000513785 NPAS4Q8IUM7 802 aa8.23□□□□□ -1.09
SSBP2-217ENST00000513785 MRPL41Q8IXM3 137 aaKnown RBP8.23□□□□□ -1.09
SSBP2-217ENST00000513785 FAM161BQ96MY7 647 aa8.23□□□□□ -1.09
SSBP2-217ENST00000513785 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
SSBP2-217ENST00000513785 TACC3Q9Y6A5 838 aa8.23□□□□□ -1.09
SSBP2-217ENST00000513785 WASH4PA8MWX3 477 aa8.22□□□□□ -1.09
SSBP2-217ENST00000513785 CTSHP09668 335 aa8.22□□□□□ -1.09
SSBP2-217ENST00000513785 AFMP43652 599 aa8.22□□□□□ -1.09
SSBP2-217ENST00000513785 MLANAQ16655 118 aa8.22□□□□□ -1.09
SSBP2-217ENST00000513785 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
SSBP2-217ENST00000513785 KSR1Q8IVT5 923 aa8.22□□□□□ -1.09
SSBP2-217ENST00000513785 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
SSBP2-217ENST00000513785 F6X3S4 739 aa8.21□□□□□ -1.1
SSBP2-217ENST00000513785 DAB2P98082 770 aa8.21□□□□□ -1.1
SSBP2-217ENST00000513785 TSNAXIP1Q2TAA8 658 aa8.21□□□□□ -1.1
SSBP2-217ENST00000513785 THAP5Q7Z6K1 395 aa8.21□□□□□ -1.1
SSBP2-217ENST00000513785 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.1
SSBP2-217ENST00000513785 MCATQ8IVS2 390 aaKnown RBP8.21□□□□□ -1.1
SSBP2-217ENST00000513785 ACSF2Q96CM8 615 aaPredicted RBP8.21□□□□□ -1.1
SSBP2-217ENST00000513785 CORINQ9Y5Q5 1042 aa8.21□□□□□ -1.1
SSBP2-217ENST00000513785 DBX1A6NMT0 343 aa8.2□□□□□ -1.1
SSBP2-217ENST00000513785 RPL6Q02878 288 aaKnown RBP8.2□□□□□ -1.1
SSBP2-217ENST00000513785 PSMD2Q13200 908 aa8.2□□□□□ -1.1
SSBP2-217ENST00000513785 TAF1CQ15572 869 aaPredicted RBP8.2□□□□□ -1.1
SSBP2-217ENST00000513785 SLC6A19Q695T7 634 aa8.2□□□□□ -1.1
SSBP2-217ENST00000513785 DNAJC14Q6Y2X3 702 aaPredicted RBP8.2□□□□□ -1.1
SSBP2-217ENST00000513785 PHC3Q8NDX5 983 aa8.2□□□□□ -1.1
SSBP2-217ENST00000513785 DNAJB8Q8NHS0 232 aa8.2□□□□□ -1.1
SSBP2-217ENST00000513785 KIRREL1Q96J84 757 aa8.2□□□□□ -1.1
SSBP2-217ENST00000513785 UPK3BL1B0FP48 263 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 UPK3BL2E5RIL1 263 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 CYP7A1P22680 504 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 GDNFP39905 211 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 PKN1Q16512 942 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 PRR23BQ6ZRT6 265 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 Q96M66 194 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 FAM53CQ9NYF3 392 aa8.19□□□□□ -1.1
SSBP2-217ENST00000513785 ESR1P03372 595 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 GLI1P08151 1106 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 KIR3DL1P43629 444 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 TAGLNQ01995 201 aaKnown RBP8.18□□□□□ -1.1
SSBP2-217ENST00000513785 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
SSBP2-217ENST00000513785 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 ALPK1Q96QP1 1244 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 SLC38A3Q99624 504 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
SSBP2-217ENST00000513785 SLAMF8Q9P0V8 285 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 USP31Q70CQ4 1352 aa8.18□□□□□ -1.1
SSBP2-217ENST00000513785 DNAJC25-GNG10A0A024R161 153 aa8.17□□□□□ -1.1
SSBP2-217ENST00000513785 ST13P50502 369 aaKnown RBP8.17□□□□□ -1.1
SSBP2-217ENST00000513785 PDE4BQ07343 736 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms