RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 GAKO14976 1311 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 A0A0G2JLW4 131 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 PFKFB2O60825 505 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 PDE4BQ07343 736 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 DALRD3Q5D0E6 543 aaKnown RBP11.62□□□□□ -0.55
TPM3-221ENST00000513769 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 SGMS1Q86VZ5 419 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 ESR2Q92731 530 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 WBP1LQ9NX94 342 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.62□□□□□ -0.55
TPM3-221ENST00000513769 AATFQ9NY61 560 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM3-221ENST00000513769 ZSWIM5Q9P217 1185 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 LTBP1Q14766 1721 aa11.62□□□□□ -0.55
TPM3-221ENST00000513769 COL1A1P02452 1464 aaPredicted RBP11.62□□□□□ -0.55
TPM3-221ENST00000513769 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 MYO5AQ9Y4I1 1855 aaKnown RBP11.61□□□□□ -0.55
TPM3-221ENST00000513769 USP17L12C9JPN9 530 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 USP17L21D6R901 530 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 SMAPO00193 183 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 PRC1O43663 620 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 PRKAB2O43741 272 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 C21orf2O43822 256 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 ORC4O43929 436 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 CPA1P15085 419 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
TPM3-221ENST00000513769 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 IGDCC4Q8TDY8 1250 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 ANP32EQ9BTT0 268 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
TPM3-221ENST00000513769 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
TPM3-221ENST00000513769 ATP6V1DQ9Y5K8 247 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 CACNA1SQ13698 1873 aa11.61□□□□□ -0.55
TPM3-221ENST00000513769 ERICH2A1L162 156 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 PDIA3P30101 505 aaKnown RBP11.6□□□□□ -0.55
TPM3-221ENST00000513769 USP5P45974 858 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 HAND2P61296 217 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 HMGN5P82970 282 aaKnown RBP11.6□□□□□ -0.55
TPM3-221ENST00000513769 SYNE3Q6ZMZ3 975 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 BRF1Q92994 677 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 TEKT1Q969V4 418 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 ZDHHC15Q96MV8 337 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
TPM3-221ENST00000513769 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
TPM3-221ENST00000513769 MYH13Q9UKX3 1938 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 KIF13BQ9NQT8 1826 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 CCDC196A0A1B0GTZ2 297 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 ECE2O60344 883 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 VIL1P09327 827 aaKnown RBP11.59□□□□□ -0.55
TPM3-221ENST00000513769 NFKBIBQ15653 356 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 DACT2Q5SW24 774 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 SDR42E1Q8WUS8 393 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 GTF3C6Q969F1 213 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 GPR101Q96P66 508 aaPredicted RBP11.59□□□□□ -0.55
TPM3-221ENST00000513769 TCP11L1Q9NUJ3 509 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 TTF2Q9UNY4 1162 aaKnown RBP11.59□□□□□ -0.55
TPM3-221ENST00000513769 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
TPM3-221ENST00000513769 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 C3orf80F5H4A9 247 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 PPIP5K2O43314 1243 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 BRD1O95696 1058 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 BTDP43251 543 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 RHBDL3P58872 404 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
TPM3-221ENST00000513769 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 SMARCC2Q8TAQ2 1214 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 ANKS1AQ92625 1134 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 TNPO1Q92973 898 aaKnown RBP11.58□□□□□ -0.56
TPM3-221ENST00000513769 DHX36Q9H2U1 1008 aaKnown RBP11.58□□□□□ -0.56
TPM3-221ENST00000513769 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 TSR3Q9UJK0 312 aaKnown RBP11.58□□□□□ -0.56
TPM3-221ENST00000513769 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
TPM3-221ENST00000513769 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 B4E1Z4 1266 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 IFIT3O14879 490 aaKnown RBP11.57□□□□□ -0.56
TPM3-221ENST00000513769 KDM4AO75164 1064 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CDKL5O76039 1030 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CALM1P0DP23 149 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CALM2P0DP24 149 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CALM3P0DP25 149 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 ANTXR2P58335 489 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CTDSPL2Q05D32 466 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
TPM3-221ENST00000513769 LARP1BQ659C4 914 aaKnown RBP11.57□□□□□ -0.56
TPM3-221ENST00000513769 DGKHQ86XP1 1220 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 TBC1D10CQ8IV04 446 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 CCDC83Q8IWF9 413 aa11.57□□□□□ -0.56
TPM3-221ENST00000513769 ZNF444Q8N0Y2 327 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms