RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 HMGCS2P54868 508 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 DYNLL1P63167 89 aaKnown RBP8.84□□□□□ -0.99
HTT-212ENST00000513639 CERKLQ49MI3 558 aaPredicted RBP8.84□□□□□ -0.99
HTT-212ENST00000513639 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 PXYLP1Q8TE99 480 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 CRNKL1Q9BZJ0 848 aaKnown RBP8.84□□□□□ -0.99
HTT-212ENST00000513639 LRRCC1Q9C099 1032 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 EHD4Q9H223 541 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 ANTXR1Q9H6X2 564 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
HTT-212ENST00000513639 SAP30BPQ9UHR5 308 aaKnown RBP8.84□□□□□ -0.99
HTT-212ENST00000513639 MYPNQ86TC9 1320 aa8.83□□□□□ -1
HTT-212ENST00000513639 GOLIM4O00461 696 aa8.83□□□□□ -1
HTT-212ENST00000513639 TNPO2O14787 897 aaKnown RBP8.83□□□□□ -1
HTT-212ENST00000513639 PDE6AP16499 860 aa8.83□□□□□ -1
HTT-212ENST00000513639 USP14P54578 494 aa8.83□□□□□ -1
HTT-212ENST00000513639 IRX3P78415 501 aaPredicted RBP8.83□□□□□ -1
HTT-212ENST00000513639 IRF5Q13568 498 aa8.83□□□□□ -1
HTT-212ENST00000513639 RRP1BQ14684 758 aaKnown RBP8.83□□□□□ -1
HTT-212ENST00000513639 FAM110CQ1W6H9 321 aa8.83□□□□□ -1
HTT-212ENST00000513639 TREML2Q5T2D2 321 aa8.83□□□□□ -1
HTT-212ENST00000513639 ZSCAN25Q6NSZ9 544 aa8.83□□□□□ -1
HTT-212ENST00000513639 TATDN1Q6P1N9 297 aa8.83□□□□□ -1
HTT-212ENST00000513639 USP17L2Q6R6M4 530 aa8.83□□□□□ -1
HTT-212ENST00000513639 ANKRD13CQ8N6S4 541 aa8.83□□□□□ -1
HTT-212ENST00000513639 SH3TC2Q8TF17 1288 aa8.83□□□□□ -1
HTT-212ENST00000513639 GTF3C2Q8WUA4 911 aaPredicted RBP8.83□□□□□ -1
HTT-212ENST00000513639 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
HTT-212ENST00000513639 DNAJC2Q99543 621 aaKnown RBP8.83□□□□□ -1
HTT-212ENST00000513639 ASCC2Q9H1I8 757 aaPredicted RBP8.83□□□□□ -1
HTT-212ENST00000513639 PAG1Q9NWQ8 432 aa8.83□□□□□ -1
HTT-212ENST00000513639 NDUFB9Q9Y6M9 179 aa8.83□□□□□ -1
HTT-212ENST00000513639 CEP290O15078 2479 aa8.82□□□□□ -1
HTT-212ENST00000513639 ADCY3O60266 1144 aa8.82□□□□□ -1
HTT-212ENST00000513639 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
HTT-212ENST00000513639 GJB1P08034 283 aa8.82□□□□□ -1
HTT-212ENST00000513639 CTGFP29279 349 aa8.82□□□□□ -1
HTT-212ENST00000513639 FLT3LGP49771 235 aa8.82□□□□□ -1
HTT-212ENST00000513639 PRKCZQ05513 592 aa8.82□□□□□ -1
HTT-212ENST00000513639 MTMR2Q13614 643 aa8.82□□□□□ -1
HTT-212ENST00000513639 ABCB5Q2M3G0 1257 aa8.82□□□□□ -1
HTT-212ENST00000513639 CCDC84Q86UT8 332 aaPredicted RBP8.82□□□□□ -1
HTT-212ENST00000513639 CCAR1Q8IX12 1150 aaKnown RBP8.82□□□□□ -1
HTT-212ENST00000513639 AMOTL1Q8IY63 956 aa8.82□□□□□ -1
HTT-212ENST00000513639 GPRC5AQ8NFJ5 357 aa8.82□□□□□ -1
HTT-212ENST00000513639 GCC1Q96CN9 775 aa8.82□□□□□ -1
HTT-212ENST00000513639 GPATCH3Q96I76 525 aa8.82□□□□□ -1
HTT-212ENST00000513639 P2RX7Q99572 595 aaKnown RBP8.82□□□□□ -1
HTT-212ENST00000513639 HAUS7Q99871 368 aa8.82□□□□□ -1
HTT-212ENST00000513639 RIOK1Q9BRS2 568 aaKnown RBP8.82□□□□□ -1
HTT-212ENST00000513639 RNF208Q9H0X6 261 aa8.82□□□□□ -1
HTT-212ENST00000513639 BOLA2Q9H3K6 86 aa8.82□□□□□ -1
HTT-212ENST00000513639 ATP8A2Q9NTI2 1148 aa8.82□□□□□ -1
HTT-212ENST00000513639 MCM9Q9NXL9 1143 aa8.82□□□□□ -1
HTT-212ENST00000513639 ZBTB21Q9ULJ3 1066 aa8.82□□□□□ -1
HTT-212ENST00000513639 SSUH2Q9Y2M2 353 aa8.82□□□□□ -1
HTT-212ENST00000513639 ZNF532Q9HCE3 1301 aa8.81□□□□□ -1
HTT-212ENST00000513639 OTOFQ9HC10 1997 aa8.81□□□□□ -1
HTT-212ENST00000513639 MKI67P46013 3256 aaKnown RBP8.81□□□□□ -1
HTT-212ENST00000513639 USP17L15C9J2P7 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L11C9JVI0 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L18D6R9N7 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L22D6RA61 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L19D6RCP7 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L20D6RJB6 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 GDF11O95390 407 aa8.81□□□□□ -1
HTT-212ENST00000513639 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
HTT-212ENST00000513639 GH2P01242 217 aa8.81□□□□□ -1
HTT-212ENST00000513639 CCL5P13501 91 aa8.81□□□□□ -1
HTT-212ENST00000513639 USP17L24Q0WX57 530 aa8.81□□□□□ -1
HTT-212ENST00000513639 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
HTT-212ENST00000513639 UBE3CQ15386 1083 aa8.81□□□□□ -1
HTT-212ENST00000513639 LRRFIP1Q32MZ4 808 aaKnown RBP8.81□□□□□ -1
HTT-212ENST00000513639 DCTPP1Q9H773 170 aa8.81□□□□□ -1
HTT-212ENST00000513639 ECHDC1Q9NTX5 307 aa8.81□□□□□ -1
HTT-212ENST00000513639 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.81□□□□□ -1
HTT-212ENST00000513639 LAMB1P07942 1786 aa8.81□□□□□ -1
HTT-212ENST00000513639 TCRBV5S4A2TA0A5A2 114 aa8.8□□□□□ -1
HTT-212ENST00000513639 GLRX3O76003 335 aaKnown RBP8.8□□□□□ -1
HTT-212ENST00000513639 MAPK4P31152 587 aa8.8□□□□□ -1
HTT-212ENST00000513639 GJA8P48165 433 aa8.8□□□□□ -1
HTT-212ENST00000513639 PLCD1P51178 756 aa8.8□□□□□ -1
HTT-212ENST00000513639 HERVK_113P62684 666 aa8.8□□□□□ -1
HTT-212ENST00000513639 CCNA1P78396 465 aa8.8□□□□□ -1
HTT-212ENST00000513639 JAG1P78504 1218 aa8.8□□□□□ -1
HTT-212ENST00000513639 C20orf194Q5TEA3 1177 aa8.8□□□□□ -1
HTT-212ENST00000513639 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
HTT-212ENST00000513639 FEZ1Q99689 392 aa8.8□□□□□ -1
HTT-212ENST00000513639 KIAA1683Q9H0B3 1180 aa8.8□□□□□ -1
HTT-212ENST00000513639 DNAJC18Q9H819 358 aa8.8□□□□□ -1
HTT-212ENST00000513639 EMILIN3Q9NT22 766 aa8.8□□□□□ -1
HTT-212ENST00000513639 HOXC10Q9NYD6 342 aa8.8□□□□□ -1
HTT-212ENST00000513639 MORF4L1Q9UBU8 362 aa8.8□□□□□ -1
HTT-212ENST00000513639 SWAP70Q9UH65 585 aa8.8□□□□□ -1
HTT-212ENST00000513639 GABRQQ9UN88 632 aa8.8□□□□□ -1
HTT-212ENST00000513639 SGPL1O95470 568 aa8.79□□□□□ -1
HTT-212ENST00000513639 TFRCP02786 760 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms