RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.77■□□□□ 0.44
LETM1-207ENST00000512669 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.44
LETM1-207ENST00000512669 MORF4L1Q9UBU8 362 aa17.77■□□□□ 0.44
LETM1-207ENST00000512669 BAG3O95817 575 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 BMP8BP34820 402 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 ADGRA1Q86SQ6 560 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 RPAP2Q8IXW5 612 aaPredicted RBP17.76■□□□□ 0.43
LETM1-207ENST00000512669 TEX11Q8IYF3 940 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 WDR18Q9BV38 432 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 NBPF3Q9H094 633 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 TMOD4Q9NZQ9 345 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 ALPK3Q96L96 1907 aa17.76■□□□□ 0.43
LETM1-207ENST00000512669 LAMA3Q16787 3333 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 ASNSP08243 561 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
LETM1-207ENST00000512669 PDE3AQ14432 1141 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 TRMT44Q8IYL2 757 aaKnown RBP17.75■□□□□ 0.43
LETM1-207ENST00000512669 RHPN1Q8TCX5 695 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 GTF3C2Q8WUA4 911 aaPredicted RBP17.75■□□□□ 0.43
LETM1-207ENST00000512669 SOCS4Q8WXH5 440 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 GJD2Q9UKL4 321 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 NDUFB9Q9Y6M9 179 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 MAST2Q6P0Q8 1798 aa17.75■□□□□ 0.43
LETM1-207ENST00000512669 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
LETM1-207ENST00000512669 C19orf81C9J6K1 198 aa17.74■□□□□ 0.43
LETM1-207ENST00000512669 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
LETM1-207ENST00000512669 BACE1P56817 501 aa17.74■□□□□ 0.43
LETM1-207ENST00000512669 STAP2Q9UGK3 403 aa17.74■□□□□ 0.43
LETM1-207ENST00000512669 XRCC5P13010 732 aaKnown RBP17.73■□□□□ 0.43
LETM1-207ENST00000512669 AACSQ86V21 672 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 SH3RF3Q8TEJ3 882 aaPredicted RBP17.73■□□□□ 0.43
LETM1-207ENST00000512669 DIS3LQ8TF46 1054 aaKnown RBP17.73■□□□□ 0.43
LETM1-207ENST00000512669 GDF15Q99988 308 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 NUDT12Q9BQG2 462 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 ANTXR1Q9H6X2 564 aa17.73■□□□□ 0.43
LETM1-207ENST00000512669 MTMR2Q13614 643 aa17.72■□□□□ 0.43
LETM1-207ENST00000512669 NAA16Q6N069 864 aaPredicted RBP17.72■□□□□ 0.43
LETM1-207ENST00000512669 FOXP4Q8IVH2 680 aaPredicted RBP17.72■□□□□ 0.43
LETM1-207ENST00000512669 GPRC5AQ8NFJ5 357 aa17.72■□□□□ 0.43
LETM1-207ENST00000512669 C11orf49Q9H6J7 331 aa17.72■□□□□ 0.43
LETM1-207ENST00000512669 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
LETM1-207ENST00000512669 APBB1O00213 710 aa17.71■□□□□ 0.43
LETM1-207ENST00000512669 MAPK4P31152 587 aa17.71■□□□□ 0.43
LETM1-207ENST00000512669 PPP4CP60510 307 aa17.71■□□□□ 0.43
LETM1-207ENST00000512669 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
LETM1-207ENST00000512669 MAP3K21Q5TCX8 1036 aa17.71■□□□□ 0.43
LETM1-207ENST00000512669 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.43
LETM1-207ENST00000512669 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
LETM1-207ENST00000512669 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.43
LETM1-207ENST00000512669 DDX60LQ5H9U9 1706 aaKnown RBP17.71■□□□□ 0.43
LETM1-207ENST00000512669 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 FOCADQ5VW36 1801 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 USP17L10C9JJH3 530 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 SOX1O00570 391 aaPredicted RBP17.7■□□□□ 0.42
LETM1-207ENST00000512669 HERVK_113P62684 666 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 RRP1BQ14684 758 aaKnown RBP17.7■□□□□ 0.42
LETM1-207ENST00000512669 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
LETM1-207ENST00000512669 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
LETM1-207ENST00000512669 TRIB2Q92519 343 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 SIPA1L1O43166 1804 aa17.7■□□□□ 0.42
LETM1-207ENST00000512669 HMMRO75330 724 aa17.69■□□□□ 0.42
LETM1-207ENST00000512669 HLA-DOAP06340 250 aa17.69■□□□□ 0.42
LETM1-207ENST00000512669 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
LETM1-207ENST00000512669 DYNLL1P63167 89 aaKnown RBP17.69■□□□□ 0.42
LETM1-207ENST00000512669 LRIT3Q3SXY7 679 aa17.69■□□□□ 0.42
LETM1-207ENST00000512669 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
LETM1-207ENST00000512669 LRCH3Q96II8 777 aa17.69■□□□□ 0.42
LETM1-207ENST00000512669 FLT1P17948 1338 aa17.69■□□□□ 0.42
LETM1-207ENST00000512669 ZKSCAN1P17029 563 aaPredicted RBP17.68■□□□□ 0.42
LETM1-207ENST00000512669 CYP2B6P20813 491 aa17.68■□□□□ 0.42
LETM1-207ENST00000512669 RGS2P41220 211 aa17.68■□□□□ 0.42
LETM1-207ENST00000512669 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
LETM1-207ENST00000512669 ZMYND8Q9ULU4 1186 aaPredicted RBP17.68■□□□□ 0.42
LETM1-207ENST00000512669 CDK5RAP2Q96SN8 1893 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 MYO5AQ9Y4I1 1855 aaKnown RBP17.67■□□□□ 0.42
LETM1-207ENST00000512669 DLL1O00548 723 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 RAB11FIP3O75154 756 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 CYP7A1P22680 504 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 MNX1P50219 401 aaPredicted RBP17.67■□□□□ 0.42
LETM1-207ENST00000512669 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 ERVK-24P63145 666 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 TRIM32Q13049 653 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 TDHQ8IZJ6 230 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 CLASRPQ8N2M8 674 aaKnown RBP17.67■□□□□ 0.42
LETM1-207ENST00000512669 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 CHMP4BQ9H444 224 aaKnown RBP17.67■□□□□ 0.42
LETM1-207ENST00000512669 ZBTB21Q9ULJ3 1066 aa17.67■□□□□ 0.42
LETM1-207ENST00000512669 IDH1O75874 414 aaKnown RBP17.66■□□□□ 0.42
LETM1-207ENST00000512669 GLRX3O76003 335 aaKnown RBP17.66■□□□□ 0.42
LETM1-207ENST00000512669 CCNA1P78396 465 aa17.66■□□□□ 0.42
LETM1-207ENST00000512669 TMED8Q6PL24 325 aaPredicted RBP17.66■□□□□ 0.42
LETM1-207ENST00000512669 USP17L2Q6R6M4 530 aa17.66■□□□□ 0.42
LETM1-207ENST00000512669 MAPKAPK5Q8IW41 473 aa17.66■□□□□ 0.42
LETM1-207ENST00000512669 APBA2Q99767 749 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms