RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	FAM86C1	Q9NVL1	165 aa		5.09	□□□□□ -1.59
CAST-238	ENST00000512620	ACTR10	Q9NZ32	417 aa		5.09	□□□□□ -1.59
CAST-238	ENST00000512620	U2SURP	O15042	1029 aa	Known RBP	5.08	□□□□□ -1.6
CAST-238	ENST00000512620	PPM1G	O15355	546 aa	Predicted RBP	5.08	□□□□□ -1.6
CAST-238	ENST00000512620	ATE1	O95260	518 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	NEFM	P07197	916 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	SERINC3	Q13530	473 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	NKG7	Q16617	165 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	5.08	□□□□□ -1.6
CAST-238	ENST00000512620	ZBTB37	Q5TC79	503 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	SCARA3	Q6AZY7	606 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	FAM13C	Q8NE31	585 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	XAGE3	Q8WTP9	111 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	TMEM40	Q8WWA1	233 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	ACSF2	Q96CM8	615 aa	Predicted RBP	5.08	□□□□□ -1.6
CAST-238	ENST00000512620	SRPK1	Q96SB4	655 aa	Known RBP	5.08	□□□□□ -1.6
CAST-238	ENST00000512620	WNT10A	Q9GZT5	417 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	RNF208	Q9H0X6	261 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	CRIM1	Q9NZV1	1036 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	USP21	Q9UK80	565 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	PCDHB10	Q9UN67	800 aa		5.08	□□□□□ -1.6
CAST-238	ENST00000512620	FAM221B	A6H8Z2	402 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	SLC22A31	A6NKX4	558 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620		F8W735	103 aa	Predicted RBP	5.07	□□□□□ -1.6
CAST-238	ENST00000512620	EIF4EBP3	O60516	100 aa	Predicted RBP	5.07	□□□□□ -1.6
CAST-238	ENST00000512620	ACR	P10323	421 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	ELN	P15502	786 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	RAB6A	P20340	208 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	NTF4	P34130	210 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	ASPA	P45381	313 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	RING1	Q06587	406 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	SOX4	Q06945	474 aa	Predicted RBP	5.07	□□□□□ -1.6
CAST-238	ENST00000512620	PDE4B	Q07343	736 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	NFE2L2	Q16236	605 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	NBPF6	Q5VWK0	638 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	FDX2	Q6P4F2	183 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	IGF2-AS	Q6U949	168 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	TTC6	Q86TZ1	520 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	ATG4C	Q96DT6	458 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	NBPF4	Q96M43	638 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	MRPL18	Q9H0U6	180 aa	Known RBP	5.07	□□□□□ -1.6
CAST-238	ENST00000512620	CYP4F12	Q9HCS2	524 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	SSU72	Q9NP77	194 aa	Known RBP	5.07	□□□□□ -1.6
CAST-238	ENST00000512620	FAM105A	Q9NUU6	356 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	SNTG2	Q9NY99	539 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	TJP2	Q9UDY2	1190 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	ACTL7B	Q9Y614	415 aa		5.07	□□□□□ -1.6
CAST-238	ENST00000512620	PRR36	Q9H6K5	1346 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620		A0A1W2PQH9	124 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	TLDC2	A0PJX2	215 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	ANKRD62	A6NC57	917 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	DDAH1	O94760	285 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	IMPDH2	P12268	514 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	GLB1	P16278	677 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	GUCY2C	P25092	1073 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	PREP	P48147	710 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	ERVK-24	P63145	666 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
CAST-238	ENST00000512620	ADGRE1	Q14246	886 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	TNNI3K	Q59H18	835 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.06	□□□□□ -1.6
CAST-238	ENST00000512620	NLRC3	Q7RTR2	1065 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	JAZF1	Q86VZ6	243 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	PHACTR4	Q8IZ21	702 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.06	□□□□□ -1.6
CAST-238	ENST00000512620	RNF214	Q8ND24	703 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	ISL2	Q96A47	359 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	MRFAP1L1	Q96HT8	127 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	TMEM87B	Q96K49	555 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	SLC9A7	Q96T83	725 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	KRTAP9-9	Q9BYP9	154 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	KRTAP9-4	Q9BYQ2	154 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	PIDD1	Q9HB75	910 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	GOLGA2P5	Q9HBQ8	144 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	GMIP	Q9P107	970 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	MAPK8IP1	Q9UQF2	711 aa		5.06	□□□□□ -1.6
CAST-238	ENST00000512620	LTBP3	Q9NS15	1303 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	MEGF11	A6BM72	1044 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	HYAL3	O43820	417 aa	Predicted RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	TIAF1	O95411	115 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	GJB6	O95452	261 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	NME1	P15531	152 aa	Known RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	RAG1	P15918	1043 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	IREB2	P48200	963 aa	Known RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	NRG1	Q02297	640 aa	Predicted RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	MLEC	Q14165	292 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	RASA3	Q14644	834 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	DDR2	Q16832	855 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	TDRD10	Q5VZ19	366 aa	Known RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	UNC5A	Q6ZN44	842 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	CDC37L1	Q7L3B6	337 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	KRTAP19-1	Q8IUB9	90 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	SMG8	Q8ND04	991 aa	Known RBP	5.05	□□□□□ -1.6
CAST-238	ENST00000512620	OR6P1	Q8NGX9	317 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	DCAF11	Q8TEB1	546 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	DEPDC7	Q96QD5	511 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	KIF2C	Q99661	725 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	ATXN3L	Q9H3M9	355 aa		5.05	□□□□□ -1.6
CAST-238	ENST00000512620	SIRPG	Q9P1W8	387 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms