RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PDE8BO95263 885 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 MYZAPP0CAP1 466 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 LINC00301Q8NCQ3 95 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 CNKSR2Q8WXI2 1034 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 RABEP2Q9H5N1 569 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 PNPLA6Q8IY17 1366 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 TLDC2A0PJX2 215 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 EBAG9O00559 213 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 PPARDQ03181 441 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 GABPB1Q06547 395 aaPredicted RBP9.04□□□□□ -0.96
NEK1-208ENST00000512193 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 PPP2R5BQ15173 497 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 DCAF17Q5H9S7 520 aaPredicted RBP9.04□□□□□ -0.96
NEK1-208ENST00000512193 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 TBC1D5Q92609 795 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 JAKMIP2Q96AA8 810 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 PPP2R2CQ9Y2T4 447 aa9.04□□□□□ -0.96
NEK1-208ENST00000512193 GOLGA6L10A0A0M3HER8 536 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 PLS1Q14651 629 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 MAPKAPK5Q8IW41 473 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 PUS7LQ9H0K6 701 aaKnown RBP9.03□□□□□ -0.96
NEK1-208ENST00000512193 COBLO75128 1261 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 KRT13P13646 458 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 UBE4AQ14139 1066 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 TRIM14Q14142 442 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
NEK1-208ENST00000512193 CFAP58Q5T655 872 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 WDR78Q5VTH9 848 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 TET3O43151 1660 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 CCDC172P0C7W6 258 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 CTNNA2P26232 953 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 OAS2P29728 719 aaKnown RBP9.03□□□□□ -0.96
NEK1-208ENST00000512193 MAGEA1P43355 309 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
NEK1-208ENST00000512193 CCDC174Q6PII3 467 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 MICALL1Q8N3F8 863 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 LRWD1Q9UFC0 647 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 PLEKHG1Q9ULL1 1385 aa9.03□□□□□ -0.96
NEK1-208ENST00000512193 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 ERBB3P21860 1342 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 SMIM23A6NLE4 172 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 TMEM110-MUSTN1A8MSY1 372 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 UFL1O94874 794 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 GIMAP7Q8NHV1 300 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 ABCC3O15438 1527 aa9.02□□□□□ -0.96
NEK1-208ENST00000512193 FAM13AO94988 1023 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 KIF23Q02241 960 aaPredicted RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 NONOQ15233 471 aaKnown RBP eCLIP9.02□□□□□ -0.97
NEK1-208ENST00000512193 UBE3CQ15386 1083 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 TMEM87AQ8NBN3 555 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 TTC14Q96N46 770 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 GPR108Q9NPR9 543 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 FAM207AQ9NSI2 230 aaPredicted RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.02□□□□□ -0.972e-6■■■■□ 21.2
NEK1-208ENST00000512193 TBC1D7Q9P0N9 293 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 RPS8P62241 208 aaKnown RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 CNNM4Q6P4Q7 775 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 FAM76AQ8TAV0 307 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 TGFBRAP1Q8WUH2 860 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 PGBD1Q96JS3 809 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 PDLIM2Q96JY6 352 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 SLAIN2Q9P270 581 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 SETD1BQ9UPS6 1966 aaKnown RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 PTGDRQ13258 359 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 NR5A1Q13285 461 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 UTP14CQ5TAP6 766 aaKnown RBP9.02□□□□□ -0.97
NEK1-208ENST00000512193 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 HOOK3Q86VS8 718 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 FCHSD1Q86WN1 690 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 GRAMD1CQ8IYS0 662 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 NLRC4Q9NPP4 1024 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
NEK1-208ENST00000512193 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
NEK1-208ENST00000512193 CABP7Q86V35 215 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 CNBD1Q8NA66 436 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 OR8K1Q8NGG5 319 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 BICD1Q96G01 975 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 ZSCAN10Q96SZ4 725 aaPredicted RBP9.01□□□□□ -0.97
NEK1-208ENST00000512193 ZCCHC11Q5TAX3 1644 aaKnown RBP9.01□□□□□ -0.97
NEK1-208ENST00000512193 PRKAB2O43741 272 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 ATP1A3P13637 1013 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 PPP4R3AQ6IN85 833 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 NELFCDQ8IXH7 590 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 PLEKHA4Q9H4M7 779 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 CYP2E1P05181 493 aaPredicted RBP9.01□□□□□ -0.97
NEK1-208ENST00000512193 INF2Q27J81 1249 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 C8orf74Q6P047 294 aa9.01□□□□□ -0.97
NEK1-208ENST00000512193 SMYD4Q8IYR2 804 aaPredicted RBP9.01□□□□□ -0.97
NEK1-208ENST00000512193 PAF1Q8N7H5 531 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms