RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 ANKRD1Q15327 319 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 MAP3K11Q16584 847 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 TBC1D22AQ8WUA7 517 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 TTC14Q96N46 770 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 CWC22Q9HCG8 908 aaKnown RBP12.35□□□□□ -0.43
HOXA4-203ENST00000511914 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
HOXA4-203ENST00000511914 MYH7P12883 1935 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
HOXA4-203ENST00000511914 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 FGAP02671 866 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 CYP21A2P08686 494 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 CYP7A1P22680 504 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 INHBEP58166 350 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 GSTO1P78417 241 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 CRHR2Q13324 411 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 NAA16Q6N069 864 aaPredicted RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 GIMAP6Q6P9H5 292 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 BLOC1S2Q6QNY1 142 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 INTS4Q96HW7 963 aaKnown RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 JAKMIP1Q96N16 626 aaKnown RBP12.34□□□□□ -0.43
HOXA4-203ENST00000511914 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 ABCF2Q9UG63 623 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 LIMCH1Q9UPQ0 1083 aa12.34□□□□□ -0.43
HOXA4-203ENST00000511914 FOXP2O15409 715 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 USP2O75604 605 aaPredicted RBP12.33□□□□□ -0.44
HOXA4-203ENST00000511914 LDHCP07864 332 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
HOXA4-203ENST00000511914 IREB2P48200 963 aaKnown RBP12.33□□□□□ -0.44
HOXA4-203ENST00000511914 CUL4AQ13619 759 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 RASA3Q14644 834 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 FBXL16Q8N461 479 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 NSUN4Q96CB9 384 aaKnown RBP12.33□□□□□ -0.44
HOXA4-203ENST00000511914 NEK1Q96PY6 1258 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 IQSEC3Q9UPP2 1182 aaPredicted RBP12.33□□□□□ -0.44
HOXA4-203ENST00000511914 PPP2R3BQ9Y5P8 575 aa12.33□□□□□ -0.44
HOXA4-203ENST00000511914 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 MBD4O95243 580 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
HOXA4-203ENST00000511914 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 DDIT3P35638 169 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 CAP1Q01518 475 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 MECOMQ03112 1051 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 OTUD7BQ6GQQ9 843 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 ERO1AQ96HE7 468 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 PTPN18Q99952 460 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 UPF3BQ9BZI7 483 aaKnown RBP12.32□□□□□ -0.44
HOXA4-203ENST00000511914 TDRD3Q9H7E2 651 aaKnown RBP12.32□□□□□ -0.44
HOXA4-203ENST00000511914 SH2B1Q9NRF2 756 aaPredicted RBP12.32□□□□□ -0.44
HOXA4-203ENST00000511914 CHMP5Q9NZZ3 219 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
HOXA4-203ENST00000511914 TCP10L2B9ZVM9 353 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 ZNF213O14771 459 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 FKBP1AP62942 108 aaKnown RBP12.31□□□□□ -0.44
HOXA4-203ENST00000511914 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
HOXA4-203ENST00000511914 MFSD14BQ5SR56 506 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
HOXA4-203ENST00000511914 CHMP4CQ96CF2 233 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 OPTNQ96CV9 577 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 TTF2Q9UNY4 1162 aaKnown RBP12.31□□□□□ -0.44
HOXA4-203ENST00000511914 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
HOXA4-203ENST00000511914 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 E7EWF7 191 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
HOXA4-203ENST00000511914 PCP11498 1178 aaKnown RBP12.3□□□□□ -0.44
HOXA4-203ENST00000511914 EN2P19622 333 aaPredicted RBP12.3□□□□□ -0.44
HOXA4-203ENST00000511914 NT5C2P49902 561 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 AK2P54819 239 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 PPP4CP60510 307 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 SP3Q02447 781 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
HOXA4-203ENST00000511914 RIOK1Q9BRS2 568 aaKnown RBP12.3□□□□□ -0.44
HOXA4-203ENST00000511914 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
HOXA4-203ENST00000511914 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
HOXA4-203ENST00000511914 BAG3O95817 575 aa12.29□□□□□ -0.44
HOXA4-203ENST00000511914 APPP05067 770 aa12.29□□□□□ -0.44
HOXA4-203ENST00000511914 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
HOXA4-203ENST00000511914 PRDX5P30044 214 aa12.29□□□□□ -0.44
HOXA4-203ENST00000511914 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
HOXA4-203ENST00000511914 TNFAIP1Q13829 316 aa12.29□□□□□ -0.44
HOXA4-203ENST00000511914 HABP4Q5JVS0 413 aaKnown RBP12.29□□□□□ -0.44
HOXA4-203ENST00000511914 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms