RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 TRPC5Q9UL62 973 aaPredicted RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 PRR36Q9H6K5 1346 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 SYNMO15061 1565 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 SMCO2A6NFE2 343 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 H7C1D1 291 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 PHKA1P46020 1223 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 MCM6Q14566 821 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 MSANTD4Q8NCY6 345 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 FLAD1Q8NFF5 587 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 RBSNQ9H1K0 784 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 PAK1Q13153 545 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 CCDC122Q5T0U0 273 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 CABP7Q86V35 215 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 GPIHBP1Q8IV16 184 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 OTUD6BQ8N6M0 293 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 GTF3C6Q969F1 213 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 BLZF1Q9H2G9 400 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 DNM3Q9UQ16 869 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 PREX2Q70Z35 1606 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 PABPN1LA6NDY0 278 aaKnown RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 PPP1R2P41236 205 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 GRIPAP1Q4V328 841 aa10.14□□□□□ -0.79
NEK1-207ENST00000511633 HERC4Q5GLZ8 1057 aaPredicted RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 LRRC47Q8N1G4 583 aaKnown RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 TLR7Q9NYK1 1049 aaKnown RBP10.14□□□□□ -0.79
NEK1-207ENST00000511633 GOLGA8HP0CJ92 632 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 IRX3P78415 501 aaPredicted RBP10.13□□□□□ -0.79
NEK1-207ENST00000511633 MICALCLQ6ZW33 695 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 MYCT1Q8N699 235 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 GOLGA1Q92805 767 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 ARFGAP3Q9NP61 516 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.792e-6■■■■□ 21.2
NEK1-207ENST00000511633 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
NEK1-207ENST00000511633 KDM5CP41229 1560 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 KIF1BO60333 1816 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 DYNC1I1O14576 645 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 STAMBPO95630 424 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 NELFCDQ8IXH7 590 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 PALD1Q9ULE6 856 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 ZNF804BA4D1E1 1349 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 WDR17Q8IZU2 1322 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
NEK1-207ENST00000511633 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
NEK1-207ENST00000511633 LRRC45Q96CN5 670 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 RHOXF2BP0C7M4 288 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 KRT9P35527 623 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 POSTNQ15063 836 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 TAF12Q16514 161 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 IFT81Q8WYA0 676 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 DDX12PQ92771 950 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 RHOXF2Q9BQY4 288 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 AZI2Q9H6S1 392 aa10.13□□□□□ -0.79
NEK1-207ENST00000511633 PDE8BO95263 885 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 FGAP02671 866 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 FAM196AQ6ZSG2 479 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 TM6SF1Q9BZW5 370 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 EXOC7Q9UPT5 735 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 TNKSO95271 1327 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 CETN3O15182 167 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 BRDTQ58F21 947 aaPredicted RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 IQCGQ9H095 443 aaKnown RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 PPEF1O14829 653 aaPredicted RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 TNFAIP3P21580 790 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 FANCCQ00597 558 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 ARHGAP27Q6ZUM4 889 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 CCDC114Q96M63 670 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 SORBS3O60504 671 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 GCNT3O95395 438 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 NLRP12P59046 1061 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 TRPC3Q13507 836 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 TPH2Q8IWU9 490 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
NEK1-207ENST00000511633 KIFAP3Q92845 792 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 PAGR1Q9BTK6 254 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 TPCN1Q9ULQ1 816 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 SHROOM2Q13796 1616 aa10.12□□□□□ -0.79
NEK1-207ENST00000511633 ERBB3P21860 1342 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 ZNF335Q9H4Z2 1342 aaPredicted RBP10.11□□□□□ -0.79
NEK1-207ENST00000511633 SMIM23A6NLE4 172 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 PLCD3Q8N3E9 789 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 GPKOWQ92917 476 aaPredicted RBP eCLIP10.11□□□□□ -0.792e-6■■■□□ 15.9
NEK1-207ENST00000511633 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 TSGA10Q9BZW7 698 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 MRPL44Q9H9J2 332 aaKnown RBP10.11□□□□□ -0.79
NEK1-207ENST00000511633 TAB2Q9NYJ8 693 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 SSX2IPQ9Y2D8 614 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 DKC1O60832 514 aaKnown RBP eCLIP10.11□□□□□ -0.79
NEK1-207ENST00000511633 ADD1P35611 737 aaKnown RBP10.11□□□□□ -0.79
NEK1-207ENST00000511633 PNOCQ13519 176 aa10.11□□□□□ -0.79
NEK1-207ENST00000511633 PPP1R7Q15435 360 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms