RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 FLCNQ8NFG4 579 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 UBE2Q2Q8WVN8 375 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 ASIC4Q96FT7 647 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 ZC3H7BQ9UGR2 993 aaKnown RBP6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 GTF2IRD1Q9UHL9 959 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 ADAM30Q9UKF2 790 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 RB1CC1Q8TDY2 1594 aa6.76□□□□□ -1.33
HMGB3P13-201ENST00000511263 PGRP06401 933 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 CAP2P40123 477 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 INPP5AQ14642 412 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 NPM2Q86SE8 214 aaKnown RBP6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 COX4I2Q96KJ9 171 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 LRRC4CQ9HCJ2 640 aa6.75□□□□□ -1.33
HMGB3P13-201ENST00000511263 GFRA2O00451 464 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 CILPO75339 1184 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 NEFMP07197 916 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 CYP7A1P22680 504 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 YARSP54577 528 aaKnown RBP6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 SEZ6L2Q6UXD5 910 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 FAM196AQ6ZSG2 479 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 KIAA0825Q8IV33 1275 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 FOXQ1Q9C009 403 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 C1GALT1Q9NS00 363 aa6.74□□□□□ -1.33
HMGB3P13-201ENST00000511263 DYNC1LI2O43237 492 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 F13A1P00488 732 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 GRK4P32298 578 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 FANCCQ00597 558 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 FAM160A1Q05DH4 1040 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 ZNF574Q6ZN55 896 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 ANP32EQ9BTT0 268 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 SPON2Q9BUD6 331 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 MKNK2Q9HBH9 465 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 LGR6Q9HBX8 967 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 PRDM10Q9NQV6 1147 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 KCNQ5Q9NR82 932 aa6.73□□□□□ -1.33
HMGB3P13-201ENST00000511263 FAM221AA4D161 298 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 PAPLNO95428 1278 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 RECKO95980 971 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 JUNBP17275 347 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 PLCG1P19174 1290 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 LCE4AQ5TA78 99 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 BNC2Q6ZN30 1099 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 ZNF296Q8WUU4 475 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 LRRC3Q9BY71 257 aa6.72□□□□□ -1.33
HMGB3P13-201ENST00000511263 ZNF165P49910 485 aa6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 CDK5R2Q13319 367 aa6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 ZNF648Q5T619 568 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 MRPL41Q8IXM3 137 aaKnown RBP6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 TOP6BLQ8N6T0 577 aa6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 DUSP23Q9BVJ7 150 aa6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.34
HMGB3P13-201ENST00000511263 GNAT3A8MTJ3 354 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 E9PSI1 815 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 F6X3S4 739 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 CST3P01034 146 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 IMPDH2P12268 514 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 ZEB1P37275 1124 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 ETV3P41162 512 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 LRRFIP1Q32MZ4 808 aaKnown RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 TMEM201Q5SNT2 666 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 FBXL19Q6PCT2 694 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 SPRED2Q7Z698 418 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 MCATQ8IVS2 390 aaKnown RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 STK11IPQ8N1F8 1099 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 AGBL5Q8NDL9 886 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 BCL7CQ8WUZ0 217 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 NKD1Q969G9 470 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 MISP3Q96FF7 219 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 COPRSQ9NQ92 184 aa6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P13-201ENST00000511263 CARMIL2Q6F5E8 1435 aa6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 GREM1O60565 184 aa6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 NTF4P34130 210 aa6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 COL9A2Q14055 689 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 REXO1Q8N1G1 1221 aaKnown RBP6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 FAM13CQ8NE31 585 aa6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 MAPK8IP1Q9UQF2 711 aa6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 PRR36Q9H6K5 1346 aa6.69□□□□□ -1.34
HMGB3P13-201ENST00000511263 MCM4P33991 863 aa6.68□□□□□ -1.34
HMGB3P13-201ENST00000511263 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
HMGB3P13-201ENST00000511263 GNL2Q13823 731 aaKnown RBP6.68□□□□□ -1.34
HMGB3P13-201ENST00000511263 NETO1Q8TDF5 533 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms