RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 TTF2Q9UNY4 1162 aaKnown RBP10.37□□□□□ -0.75
SNF8-210ENST00000511214 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 B4E1Z4 1266 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
SNF8-210ENST00000511214 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
SNF8-210ENST00000511214 XBP1P17861 261 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 TOB1P50616 345 aaPredicted RBP10.36□□□□□ -0.75
SNF8-210ENST00000511214 FMR1Q06787 632 aaKnown RBP eCLIP10.36□□□□□ -0.75
SNF8-210ENST00000511214 SPAG1Q07617 926 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 RTN1Q16799 776 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 WHAMMP3Q1A5X7 153 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 AKNAD1Q5T1N1 836 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 CDKAL1Q5VV42 579 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 TOGARAM2Q6ZUX3 1019 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 RASGRP2Q7LDG7 609 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 SH3RF1Q7Z6J0 888 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 MICU3Q86XE3 530 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 DIS3L2Q8IYB7 885 aaKnown RBP10.36□□□□□ -0.75
SNF8-210ENST00000511214 PDILTQ8N807 584 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 PHKBQ93100 1093 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 FERMT2Q96AC1 680 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 AIDAQ96BJ3 306 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 GSDMAQ96QA5 445 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 SLC26A6Q9BXS9 759 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 RNF41Q9H4P4 317 aaPredicted RBP10.36□□□□□ -0.75
SNF8-210ENST00000511214 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
SNF8-210ENST00000511214 SPATA31A3Q5VYP0 1347 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 MROH5Q6ZUA9 1318 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 ZNF532Q9HCE3 1301 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 ERICH4A6NGS2 130 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 POLR2DO15514 142 aaKnown RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 MFAP3LO75121 409 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 SASH3O75995 380 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 PDE8BO95263 885 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 APPP05067 770 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 ATF3P18847 181 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 HNRNPH2P55795 449 aaKnown RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 CHMP4BP1P59074 171 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 SEMA3FQ13275 785 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 CUL4BQ13620 913 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 LONRF2Q1L5Z9 754 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 GIGYF2Q6Y7W6 1299 aaKnown RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 LDHAL6AQ6ZMR3 332 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 APTXQ7Z2E3 356 aaKnown RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 HDXQ7Z353 690 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 RAB11FIP4Q86YS3 637 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 TMTC1Q8IUR5 882 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 IFNL3Q8IZI9 196 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 CRACR2BQ8N4Y2 399 aaPredicted RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 TTLL11Q8NHH1 800 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 GOLGA5Q8TBA6 731 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 DHX58Q96C10 678 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 RNF26Q9BY78 433 aaPredicted RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 NACAP1Q9BZK3 213 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 NAPBQ9H115 298 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 ACBD3Q9H3P7 528 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 PIH1D3Q9NQM4 214 aaKnown RBP10.35□□□□□ -0.75
SNF8-210ENST00000511214 RTL9Q8NET4 1388 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 DOCK2Q92608 1830 aa10.35□□□□□ -0.75
SNF8-210ENST00000511214 ERICH2A1L162 156 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 LRRC10BA6NIK2 292 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 BTBD18B2RXH4 712 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 SEC31AO94979 1220 aaKnown RBP10.34□□□□□ -0.75
SNF8-210ENST00000511214 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 FGFR2P21802 821 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 CTSWP56202 376 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 PIP4K2BP78356 416 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
SNF8-210ENST00000511214 MAP3K12Q12852 859 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 WTAPQ15007 396 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 PUM3Q15397 648 aaKnown RBP10.34□□□□□ -0.75
SNF8-210ENST00000511214 MFSD6Q6ZSS7 791 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 LPIN2Q92539 896 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 ADD3Q9UEY8 706 aaKnown RBP10.34□□□□□ -0.75
SNF8-210ENST00000511214 WWC3Q9ULE0 1092 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 SSUH2Q9Y2M2 353 aa10.34□□□□□ -0.75
SNF8-210ENST00000511214 SYNRGQ9UMZ2 1314 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 CTAGE9A4FU28 777 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 TRIM75PA6NK02 468 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 FOXN1O15353 648 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 IDH1O75874 414 aaKnown RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 IVLP07476 585 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 ITGA6P23229 1130 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 MCM3P25205 808 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 ADKP55263 362 aaKnown RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 BEND6Q5SZJ8 279 aaPredicted RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 IGSF22Q8N9C0 903 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 MED15Q96RN5 788 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 EPB41L4AQ9HCS5 686 aaPredicted RBP10.33□□□□□ -0.76
SNF8-210ENST00000511214 CNNM1Q9NRU3 951 aa10.33□□□□□ -0.76
SNF8-210ENST00000511214 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms