RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 HSP90AB1P08238 724 aaKnown RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ALADP13716 330 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 HOXD10P28358 340 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 PIP4K2AP48426 406 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 SH3BP2P78314 561 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ZNF530Q6P9A1 599 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 C17orf99Q6UX52 265 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 DZIP3Q86Y13 1208 aaKnown RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 GJD3Q8N144 294 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 EHBP1Q8NDI1 1231 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ATOH1Q92858 354 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 CRAMP1Q96RY5 1269 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ELP3Q9H9T3 547 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
CLCN3-207ENST00000511092 NIP7Q9Y221 180 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLCN3-207ENST00000511092 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 SOBPA7XYQ1 873 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 GRXCR1A8MXD5 290 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 DCXO43602 365 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 CAPN2P17655 700 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 MTHFSP49914 203 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 MFSD14AQ96MC6 490 aa8.36□□□□□ -1.07
CLCN3-207ENST00000511092 ANKRD36CQ5JPF3 1778 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 ABCC4O15439 1325 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 PTPN13Q12923 2485 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 SASH1O94885 1247 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 VIL1P09327 827 aaKnown RBP8.35□□□□□ -1.07
CLCN3-207ENST00000511092 FLT3LGP49771 235 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 RBM17Q96I25 401 aaKnown RBP8.35□□□□□ -1.07
CLCN3-207ENST00000511092 ZNF496Q96IT1 587 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-207ENST00000511092 OGDHLQ9ULD0 1010 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 FRYLO94915 3013 aa8.35□□□□□ -1.07
CLCN3-207ENST00000511092 PLXNB2O15031 1838 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 BTBD19C9JJ37 291 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 PROB1E7EW31 1015 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 J3QL48 77 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 F12P00748 615 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-207ENST00000511092 A1BGP04217 495 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 ADSSL1Q8N142 457 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
CLCN3-207ENST00000511092 PBX4Q9BYU1 374 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 NBEAQ8NFP9 2946 aa8.34□□□□□ -1.07
CLCN3-207ENST00000511092 COL4A4P53420 1690 aaPredicted RBP8.34□□□□□ -1.08
CLCN3-207ENST00000511092 GTF2E1P29083 439 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-207ENST00000511092 IL6STP40189 918 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-207ENST00000511092 KRT40Q6A162 431 aa8.33□□□□□ -1.08
CLCN3-207ENST00000511092 FAM178BQ8IXR5 827 aa8.33□□□□□ -1.08
CLCN3-207ENST00000511092 TESK2Q96S53 571 aa8.33□□□□□ -1.08
CLCN3-207ENST00000511092 HNRNPABQ99729 332 aaKnown RBP8.33□□□□□ -1.08
CLCN3-207ENST00000511092 H0Y858 1186 aa8.32□□□□□ -1.08
CLCN3-207ENST00000511092 SIAH2O43255 324 aa8.32□□□□□ -1.08
CLCN3-207ENST00000511092 TNNT2P45379 298 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-207ENST00000511092 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
CLCN3-207ENST00000511092 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-207ENST00000511092 GMLQ99445 158 aa8.32□□□□□ -1.08
CLCN3-207ENST00000511092 PRDM5Q9NQX1 630 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-207ENST00000511092 TLR9Q9NR96 1032 aa8.32□□□□□ -1.08
CLCN3-207ENST00000511092 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-207ENST00000511092 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-207ENST00000511092 WNT10BO00744 389 aa8.31□□□□□ -1.08
CLCN3-207ENST00000511092 AGERQ15109 404 aa8.31□□□□□ -1.08
CLCN3-207ENST00000511092 PPP2R2DQ66LE6 453 aa8.31□□□□□ -1.08
CLCN3-207ENST00000511092 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
CLCN3-207ENST00000511092 ARMC2Q8NEN0 867 aa8.31□□□□□ -1.08
CLCN3-207ENST00000511092 MYO18BQ8IUG5 2567 aa8.31□□□□□ -1.08
CLCN3-207ENST00000511092 AP1G2O75843 785 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 STARD3NLO95772 234 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
CLCN3-207ENST00000511092 FCGRTP55899 365 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 RTP1P59025 263 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 HERVK_113Q902F9 699 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 CHAMP1Q96JM3 812 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 TMX4Q9H1E5 349 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-207ENST00000511092 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
CLCN3-207ENST00000511092 PRKAG2Q9UGJ0 569 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 DOPEY1Q5JWR5 2465 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 CEMIPQ8WUJ3 1361 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 HECTD1Q9ULT8 2610 aa8.3□□□□□ -1.08
CLCN3-207ENST00000511092 FYB1O15117 783 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 USP2O75604 605 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-207ENST00000511092 IL9P15248 144 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 GTF2A2P52657 109 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 VCPP55072 806 aaKnown RBP8.29□□□□□ -1.08
CLCN3-207ENST00000511092 HLFQ16534 295 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 SP8Q8IXZ3 490 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 HPS1Q92902 700 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 FSD1Q9BTV5 496 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 NKX2-4Q9H2Z4 354 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 SLC52A2Q9HAB3 445 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 ATP13A2Q9NQ11 1180 aa8.29□□□□□ -1.08
CLCN3-207ENST00000511092 COG5Q9UP83 839 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms