RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 KIF22Q14807 665 aa14.71□□□□□ -0.05
CLDND1-223ENST00000511081 GADL1Q6ZQY3 521 aa14.71□□□□□ -0.05
CLDND1-223ENST00000511081 TTC6Q86TZ1 520 aa14.71□□□□□ -0.05
CLDND1-223ENST00000511081 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
CLDND1-223ENST00000511081 ARHGAP39Q9C0H5 1083 aa14.71□□□□□ -0.05
CLDND1-223ENST00000511081 SAP30BPQ9UHR5 308 aaKnown RBP14.71□□□□□ -0.05
CLDND1-223ENST00000511081 KIAA0100Q14667 2235 aaKnown RBP14.7□□□□□ -0.06
CLDND1-223ENST00000511081 GABPAQ06546 454 aa14.7□□□□□ -0.06
CLDND1-223ENST00000511081 CRACR2BQ8N4Y2 399 aaPredicted RBP14.7□□□□□ -0.06
CLDND1-223ENST00000511081 TRIM47Q96LD4 638 aa14.7□□□□□ -0.06
CLDND1-223ENST00000511081 AS3MTQ9HBK9 375 aa14.7□□□□□ -0.06
CLDND1-223ENST00000511081 ECHDC1Q9NTX5 307 aa14.7□□□□□ -0.06
CLDND1-223ENST00000511081 SERPINB13Q9UIV8 391 aa14.7□□□□□ -0.06
CLDND1-223ENST00000511081 C19orf81C9J6K1 198 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 PSMC4P43686 418 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 PLCD1P51178 756 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 BACE1P56817 501 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 UBE3CQ15386 1083 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 TREML2Q5T2D2 321 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 CRNKL1Q9BZJ0 848 aaKnown RBP14.69□□□□□ -0.06
CLDND1-223ENST00000511081 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 PTCH2Q9Y6C5 1203 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 ZSWIM8A7E2V4 1837 aa14.69□□□□□ -0.06
CLDND1-223ENST00000511081 LOC285556D6RIA3 1793 aa14.68□□□□□ -0.06
CLDND1-223ENST00000511081 HOXA7P31268 230 aaPredicted RBP14.68□□□□□ -0.06
CLDND1-223ENST00000511081 HMGCS2P54868 508 aa14.68□□□□□ -0.06
CLDND1-223ENST00000511081 SHROOM1Q2M3G4 852 aaPredicted RBP14.68□□□□□ -0.06
CLDND1-223ENST00000511081 ZNF333Q96JL9 665 aa14.68□□□□□ -0.06
CLDND1-223ENST00000511081 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLDND1-223ENST00000511081 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
CLDND1-223ENST00000511081 SRRDQ9UH36 339 aa14.68□□□□□ -0.06
CLDND1-223ENST00000511081 ZBTB21Q9ULJ3 1066 aa14.68□□□□□ -0.06
CLDND1-223ENST00000511081 PDE4DIPQ5VU43 2346 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 DDX60LQ5H9U9 1706 aaKnown RBP14.67□□□□□ -0.06
CLDND1-223ENST00000511081 USP17L10C9JJH3 530 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 OSBPP22059 807 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 HOXD10P28358 340 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 SHMT1P34896 483 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 SLFNL1Q499Z3 407 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 NBPF11Q86T75 865 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 LCORLQ8N3X6 602 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 TRIM34Q9BYJ4 488 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 ATP8A2Q9NTI2 1148 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
CLDND1-223ENST00000511081 GDF11O95390 407 aa14.66□□□□□ -0.06
CLDND1-223ENST00000511081 GH2P01242 217 aa14.66□□□□□ -0.06
CLDND1-223ENST00000511081 CHGBP05060 677 aa14.66□□□□□ -0.06
CLDND1-223ENST00000511081 GCLCP48506 637 aaPredicted RBP14.66□□□□□ -0.06
CLDND1-223ENST00000511081 PABPC4Q13310 644 aaKnown RBP eCLIP14.66□□□□□ -0.064e-9■□□□□ 10.6
CLDND1-223ENST00000511081 ZSCAN25Q6NSZ9 544 aa14.66□□□□□ -0.06
CLDND1-223ENST00000511081 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
CLDND1-223ENST00000511081 ASCC2Q9H1I8 757 aaPredicted RBP14.66□□□□□ -0.06
CLDND1-223ENST00000511081 ARMT1Q9H993 441 aa14.66□□□□□ -0.06
CLDND1-223ENST00000511081 MGAMO43451 1857 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 RBBP6Q7Z6E9 1792 aaKnown RBP14.65□□□□□ -0.06
CLDND1-223ENST00000511081 MYH7P12883 1935 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 POTEFA5A3E0 1075 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
CLDND1-223ENST00000511081 POLR3DP05423 398 aaPredicted RBP14.65□□□□□ -0.06
CLDND1-223ENST00000511081 MTMR2Q13614 643 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 AAMPQ13685 434 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 SLC4A8Q2Y0W8 1093 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
CLDND1-223ENST00000511081 SLC9C1Q4G0N8 1177 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 KBTBD3Q8NAB2 608 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 SDR42E1Q8WUS8 393 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 CRBNQ96SW2 442 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 EMILIN3Q9NT22 766 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 MCM9Q9NXL9 1143 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
CLDND1-223ENST00000511081 PRKAB2O43741 272 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 MBD4O95243 580 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 GUCY1A2P33402 732 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 FCGRTP55899 365 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 HDAC1Q13547 482 aaPredicted RBP14.64□□□□□ -0.07
CLDND1-223ENST00000511081 FAM110CQ1W6H9 321 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 SMCR8Q8TEV9 937 aaPredicted RBP14.64□□□□□ -0.07
CLDND1-223ENST00000511081 C12orf42Q96LP6 360 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 PUS7LQ9H0K6 701 aaKnown RBP14.64□□□□□ -0.07
CLDND1-223ENST00000511081 MORF4L1Q9UBU8 362 aa14.64□□□□□ -0.07
CLDND1-223ENST00000511081 ABCB5Q2M3G0 1257 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 C12orf60Q5U649 245 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 PI4K2BQ8TCG2 481 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 GPATCH3Q96I76 525 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
CLDND1-223ENST00000511081 P2RX7Q99572 595 aaKnown RBP14.63□□□□□ -0.07
CLDND1-223ENST00000511081 KIAA1683Q9H0B3 1180 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 SALL3Q9BXA9 1300 aa14.63□□□□□ -0.07
CLDND1-223ENST00000511081 ZFYP08048 801 aaPredicted RBP14.62□□□□□ -0.07
CLDND1-223ENST00000511081 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 CYP2D6P10635 497 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 IRF5Q13568 498 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 ANKRD13CQ8N6S4 541 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 NAV1Q8NEY1 1877 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 SH3TC2Q8TF17 1288 aa14.62□□□□□ -0.07
CLDND1-223ENST00000511081 YTHDC1Q96MU7 727 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms