RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PNMA3Q9UL41 463 aa27.82■■■□□ 2.04
SNF8-209ENST00000510558 ZBTB21Q9ULJ3 1066 aa27.82■■■□□ 2.04
SNF8-209ENST00000510558 ZNF333Q96JL9 665 aa27.81■■■□□ 2.04
SNF8-209ENST00000510558 SRRDQ9UH36 339 aa27.81■■■□□ 2.04
SNF8-209ENST00000510558 SERPINB13Q9UIV8 391 aa27.81■■■□□ 2.04
SNF8-209ENST00000510558 OSBPP22059 807 aa27.8■■■□□ 2.04
SNF8-209ENST00000510558 HOXD10P28358 340 aa27.8■■■□□ 2.04
SNF8-209ENST00000510558 ADD2P35612 726 aa27.8■■■□□ 2.04
SNF8-209ENST00000510558 MTMR2Q13614 643 aa27.8■■■□□ 2.04
SNF8-209ENST00000510558 NBPF11Q86T75 865 aa27.8■■■□□ 2.04
SNF8-209ENST00000510558 POTEFA5A3E0 1075 aa27.79■■■□□ 2.04
SNF8-209ENST00000510558 FCGRTP55899 365 aa27.79■■■□□ 2.04
SNF8-209ENST00000510558 BACE1P56817 501 aa27.79■■■□□ 2.04
SNF8-209ENST00000510558 PABPC4Q13310 644 aaKnown RBP eCLIP27.79■■■□□ 2.042e-8■■■□□ 14.8
SNF8-209ENST00000510558 LCORLQ8N3X6 602 aa27.79■■■□□ 2.04
SNF8-209ENST00000510558 YTHDC1Q96MU7 727 aaKnown RBP27.79■■■□□ 2.04
SNF8-209ENST00000510558 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.79■■■□□ 2.04
SNF8-209ENST00000510558 TNRC18O15417 2968 aaPredicted RBP27.79■■■□□ 2.04
SNF8-209ENST00000510558 PDE4DIPQ5VU43 2346 aa27.78■■■□□ 2.04
SNF8-209ENST00000510558 PLCD1P51178 756 aa27.78■■■□□ 2.04
SNF8-209ENST00000510558 SLFNL1Q499Z3 407 aa27.78■■■□□ 2.04
SNF8-209ENST00000510558 TATDN1Q6P1N9 297 aa27.78■■■□□ 2.04
SNF8-209ENST00000510558 MYPNQ86TC9 1320 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 GH2P01242 217 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 POLR3DP05423 398 aaPredicted RBP27.77■■■□□ 2.04
SNF8-209ENST00000510558 SH3TC2Q8TF17 1288 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 SDR42E1Q8WUS8 393 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 ECHDC1Q9NTX5 307 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 TMOD4Q9NZQ9 345 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 PCDHB15Q9Y5E8 787 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 CENPFP49454 3210 aa27.77■■■□□ 2.04
SNF8-209ENST00000510558 USP17L10C9JJH3 530 aa27.76■■■□□ 2.03
SNF8-209ENST00000510558 ANKRD13CQ8N6S4 541 aa27.76■■■□□ 2.03
SNF8-209ENST00000510558 ARMT1Q9H993 441 aa27.76■■■□□ 2.03
SNF8-209ENST00000510558 MCM9Q9NXL9 1143 aa27.76■■■□□ 2.03
SNF8-209ENST00000510558 BAZ2AQ9UIF9 1905 aaKnown RBP27.76■■■□□ 2.03
SNF8-209ENST00000510558 C19orf81C9J6K1 198 aa27.75■■■□□ 2.03
SNF8-209ENST00000510558 RAET1EQ8TD07 263 aa27.75■■■□□ 2.03
SNF8-209ENST00000510558 ASCC2Q9H1I8 757 aaPredicted RBP27.75■■■□□ 2.03
SNF8-209ENST00000510558 DCP1AQ9NPI6 582 aaPredicted RBP27.75■■■□□ 2.03
SNF8-209ENST00000510558 MBD4O95243 580 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 CHGBP05060 677 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 SHMT1P34896 483 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 UBE3CQ15386 1083 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 FAM110CQ1W6H9 321 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 CERKLQ49MI3 558 aaPredicted RBP27.74■■■□□ 2.03
SNF8-209ENST00000510558 GPATCH3Q96I76 525 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 TMEM106CQ9BVX2 250 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 MYH8P13535 1937 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 DOCK3Q8IZD9 2030 aa27.74■■■□□ 2.03
SNF8-209ENST00000510558 GCLCP48506 637 aaPredicted RBP27.73■■■□□ 2.03
SNF8-209ENST00000510558 PRKCZQ05513 592 aa27.73■■■□□ 2.03
SNF8-209ENST00000510558 GABPAQ06546 454 aa27.73■■■□□ 2.03
SNF8-209ENST00000510558 MYCP01106 439 aaPredicted RBP27.72■■■□□ 2.03
SNF8-209ENST00000510558 EVX2Q03828 476 aa27.72■■■□□ 2.03
SNF8-209ENST00000510558 ABCB5Q2M3G0 1257 aa27.72■■■□□ 2.03
SNF8-209ENST00000510558 ZSCAN25Q6NSZ9 544 aa27.72■■■□□ 2.03
SNF8-209ENST00000510558 GABRQQ9UN88 632 aa27.72■■■□□ 2.03
SNF8-209ENST00000510558 PRKAB2O43741 272 aa27.71■■■□□ 2.03
SNF8-209ENST00000510558 HOXA7P31268 230 aaPredicted RBP27.71■■■□□ 2.03
SNF8-209ENST00000510558 GRK4P32298 578 aa27.71■■■□□ 2.03
SNF8-209ENST00000510558 IRX3P78415 501 aaPredicted RBP27.71■■■□□ 2.03
SNF8-209ENST00000510558 TSHZ3Q63HK5 1081 aa27.71■■■□□ 2.03
SNF8-209ENST00000510558 CRBNQ96SW2 442 aa27.71■■■□□ 2.03
SNF8-209ENST00000510558 TNPO2O14787 897 aaKnown RBP27.7■■■□□ 2.02
SNF8-209ENST00000510558 CYP2D6P10635 497 aa27.7■■■□□ 2.02
SNF8-209ENST00000510558 EN2P19622 333 aaPredicted RBP27.7■■■□□ 2.02
SNF8-209ENST00000510558 RAB3GAP1Q15042 981 aa27.7■■■□□ 2.02
SNF8-209ENST00000510558 USP17L2Q6R6M4 530 aa27.7■■■□□ 2.02
SNF8-209ENST00000510558 CABP5Q9NP86 173 aa27.7■■■□□ 2.02
SNF8-209ENST00000510558 EMILIN3Q9NT22 766 aa27.7■■■□□ 2.02
SNF8-209ENST00000510558 ATP8A2Q9NTI2 1148 aa27.7■■■□□ 2.02
SNF8-209ENST00000510558 FEZ1Q99689 392 aa27.69■■■□□ 2.02
SNF8-209ENST00000510558 FLT3LGP49771 235 aa27.67■■■□□ 2.02
SNF8-209ENST00000510558 ZYXQ15942 572 aaKnown RBP27.67■■■□□ 2.02
SNF8-209ENST00000510558 KBTBD3Q8NAB2 608 aa27.67■■■□□ 2.02
SNF8-209ENST00000510558 C12orf42Q96LP6 360 aa27.67■■■□□ 2.02
SNF8-209ENST00000510558 P2RX7Q99572 595 aaKnown RBP27.67■■■□□ 2.02
SNF8-209ENST00000510558 PUS7LQ9H0K6 701 aaKnown RBP27.67■■■□□ 2.02
SNF8-209ENST00000510558 GUCY1A2P33402 732 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 HERVK_113P62684 666 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 MTFR1Q15390 333 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 SLC44A5Q8NCS7 719 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 SLAIN1Q8ND83 568 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 COA7Q96BR5 231 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 MORF4L1Q9UBU8 362 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 SWAP70Q9UH65 585 aa27.66■■■□□ 2.02
SNF8-209ENST00000510558 SEPT2Q15019 361 aa27.65■■■□□ 2.02
SNF8-209ENST00000510558 ACER1Q8TDN7 264 aa27.65■■■□□ 2.02
SNF8-209ENST00000510558 KIAA1683Q9H0B3 1180 aa27.65■■■□□ 2.02
SNF8-209ENST00000510558 BIN2Q9UBW5 565 aaPredicted RBP27.65■■■□□ 2.02
SNF8-209ENST00000510558 TAOK2Q9UL54 1235 aa27.65■■■□□ 2.02
SNF8-209ENST00000510558 SLC4A4Q9Y6R1 1079 aa27.65■■■□□ 2.02
SNF8-209ENST00000510558 TTC41PQ6P2S7 1318 aa27.65■■■□□ 2.02
SNF8-209ENST00000510558 MPHOSPH10O00566 681 aaKnown RBP27.64■■■□□ 2.02
SNF8-209ENST00000510558 ADCY3O60266 1144 aa27.64■■■□□ 2.02
SNF8-209ENST00000510558 USP14P54578 494 aa27.64■■■□□ 2.02
SNF8-209ENST00000510558 IRF5Q13568 498 aa27.64■■■□□ 2.02
SNF8-209ENST00000510558 DYNLL2Q96FJ2 89 aa27.64■■■□□ 2.02
SNF8-209ENST00000510558 DDRGK1Q96HY6 314 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms