RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 RABEP2Q9H5N1 569 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 BUB1BO60566 1050 aaPredicted RBP11.78□□□□□ -0.52
NEK1-206ENST00000510533 FLOT1O75955 427 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 RASA3Q14644 834 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 PARP10Q53GL7 1025 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 GKAP1Q5VSY0 366 aaPredicted RBP11.78□□□□□ -0.52
NEK1-206ENST00000510533 CCDC84Q86UT8 332 aaPredicted RBP11.78□□□□□ -0.52
NEK1-206ENST00000510533 VSIG1Q86XK7 387 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 NPC1L1Q9UHC9 1359 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 USP19O94966 1318 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 ARHGEF35A5YM69 484 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 ERCC6LQ2NKX8 1250 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
NEK1-206ENST00000510533 SH3TC1Q8TE82 1336 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 PDE8AO60658 829 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 SFMBT2Q5VUG0 894 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
NEK1-206ENST00000510533 PSMB7Q99436 277 aa11.78□□□□□ -0.52
NEK1-206ENST00000510533 ADCY7P51828 1080 aa11.77□□□□□ -0.52
NEK1-206ENST00000510533 CTDSPL2Q05D32 466 aa11.77□□□□□ -0.52
NEK1-206ENST00000510533 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.52
NEK1-206ENST00000510533 IQCDQ96DY2 449 aa11.77□□□□□ -0.52
NEK1-206ENST00000510533 CCDC51Q96ER9 411 aa11.77□□□□□ -0.52
NEK1-206ENST00000510533 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 ZNF131P52739 623 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 HHATQ5VTY9 493 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 MCUR1Q96AQ8 359 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 VCX3BQ9H321 246 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 TRPC3Q13507 836 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 CABP7Q86V35 215 aa11.77□□□□□ -0.53
NEK1-206ENST00000510533 FEZ2Q9UHY8 353 aaPredicted RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 IBTKQ9P2D0 1353 aaPredicted RBP11.77□□□□□ -0.53
NEK1-206ENST00000510533 EIF6P56537 245 aaKnown RBP11.76□□□□□ -0.53
NEK1-206ENST00000510533 SLC8A3P57103 927 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 ITIH3Q06033 890 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 GEN1Q17RS7 908 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 PEX26Q7Z412 305 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 WDR66Q8TBY9 1149 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 CCT6BQ92526 530 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 CLNS1AP54105 237 aaKnown RBP11.76□□□□□ -0.53
NEK1-206ENST00000510533 STRN3Q13033 797 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 PNOCQ13519 176 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 BRD3Q15059 726 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 TSNAXIP1Q2TAA8 658 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 CCDC62Q6P9F0 684 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 IFIH1Q9BYX4 1025 aaKnown RBP11.76□□□□□ -0.53
NEK1-206ENST00000510533 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 ATP10BO94823 1461 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 E7EWF7 191 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 ZWINTO95229 277 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 CALCRLQ16602 461 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
NEK1-206ENST00000510533 LPIN2Q92539 896 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 ARHGEF2Q92974 986 aaKnown RBP11.76□□□□□ -0.53
NEK1-206ENST00000510533 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 CRCPO75575 148 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 ME3Q16798 604 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 SDCCAG8Q86SQ7 713 aaPredicted RBP11.76□□□□□ -0.53
NEK1-206ENST00000510533 CCDC105Q8IYK2 499 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 BLZF1Q9H2G9 400 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 SERTAD1Q9UHV2 236 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 SAR1BQ9Y6B6 198 aa11.76□□□□□ -0.53
NEK1-206ENST00000510533 PPFIA4O75335 1185 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 WHAMMP3Q1A5X7 153 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 CERS3Q8IU89 383 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 ARHGAP24Q8N264 748 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 PPP1R12CQ9BZL4 782 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 ARHGEF10LQ9HCE6 1279 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 DKC1O60832 514 aaKnown RBP eCLIP11.75□□□□□ -0.53
NEK1-206ENST00000510533 DTNBO60941 627 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 UFL1O94874 794 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 BCRP11274 1271 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 ADKP55263 362 aaKnown RBP11.75□□□□□ -0.53
NEK1-206ENST00000510533 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 HGSO14964 777 aaPredicted RBP11.75□□□□□ -0.53
NEK1-206ENST00000510533 EXOC3O60645 756 aa11.75□□□□□ -0.53
NEK1-206ENST00000510533 STK10O94804 968 aaKnown RBP11.75□□□□□ -0.53
NEK1-206ENST00000510533 GPIHBP1Q8IV16 184 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms