RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 KIAA0355O15063 1070 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 CLTBP09497 229 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 RAG1P15918 1043 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 TLE2Q04725 743 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 CCDC129Q6ZRS4 1044 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 KHSRPQ92945 711 aaKnown RBP eCLIP13.64□□□□□ -0.238e-7■□□□□ 9
SNF8-207ENST00000509995 PCGF6Q9BYE7 350 aa13.64□□□□□ -0.23
SNF8-207ENST00000509995 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 GRXCR1A8MXD5 290 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 HOXA7P31268 230 aaPredicted RBP13.63□□□□□ -0.23
SNF8-207ENST00000509995 NHLH1Q02575 133 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 TRPV1Q8NER1 839 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 WDR66Q8TBY9 1149 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
SNF8-207ENST00000509995 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
SNF8-207ENST00000509995 ERC2O15083 957 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 CYBAP13498 195 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 PRDX5P30044 214 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
SNF8-207ENST00000509995 ADCYAP1R1P41586 468 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 FLIIQ13045 1269 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 Q3C1V9 767 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
SNF8-207ENST00000509995 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
SNF8-207ENST00000509995 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
SNF8-207ENST00000509995 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 CYP2C19P33261 490 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 MICALL1Q8N3F8 863 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 VGLL2Q8N8G2 317 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 FERMT2Q96AC1 680 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNF8-207ENST00000509995 PAGR1Q9BTK6 254 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 CWC22Q9HCG8 908 aaKnown RBP13.61□□□□□ -0.23
SNF8-207ENST00000509995 ZDBF2Q9HCK1 2354 aa13.61□□□□□ -0.23
SNF8-207ENST00000509995 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 USP17L5A8MUK1 530 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 TBC1D12O60347 775 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
SNF8-207ENST00000509995 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 HOXC6P09630 235 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 CALD1Q05682 793 aaKnown RBP13.6□□□□□ -0.23
SNF8-207ENST00000509995 FKBP5Q13451 457 aaPredicted RBP13.6□□□□□ -0.23
SNF8-207ENST00000509995 MTMR2Q13614 643 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
SNF8-207ENST00000509995 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
SNF8-207ENST00000509995 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
SNF8-207ENST00000509995 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
SNF8-207ENST00000509995 PDE8BO95263 885 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 IGHA2P01877 340 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
SNF8-207ENST00000509995 LRRC41Q15345 812 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 SKIV2LQ15477 1246 aaKnown RBP13.59□□□□□ -0.23
SNF8-207ENST00000509995 RAB30Q15771 203 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 RASIP1Q5U651 963 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 HERVK_113Q902F9 699 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 AS3MTQ9HBK9 375 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 TMOD4Q9NZQ9 345 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 C5orf42Q9H799 3197 aa13.59□□□□□ -0.23
SNF8-207ENST00000509995 ZNF236Q9UL36 1845 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 SLC15A5A6NIM6 579 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 GRM8O00222 908 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 TLL1O43897 1013 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 PQBP1O60828 265 aaKnown RBP13.58□□□□□ -0.24
SNF8-207ENST00000509995 CAP2P40123 477 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 BACE1P56817 501 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 PICALMQ13492 652 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 NPLOC4Q8TAT6 608 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNF8-207ENST00000509995 TMEM39AQ9NV64 488 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 MSRAQ9UJ68 235 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 GAKO14976 1311 aa13.58□□□□□ -0.24
SNF8-207ENST00000509995 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 SEPT4O43236 478 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 PTPREP23469 700 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 GRB14Q14449 540 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 LRRC24Q50LG9 513 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 NKX2-4Q9H2Z4 354 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 PHF24Q9UPV7 400 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
SNF8-207ENST00000509995 SMCHD1A6NHR9 2005 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
SNF8-207ENST00000509995 CCNA1P78396 465 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 RRP1BQ14684 758 aaKnown RBP13.56□□□□□ -0.24
SNF8-207ENST00000509995 PUM3Q15397 648 aaKnown RBP13.56□□□□□ -0.24
SNF8-207ENST00000509995 FAM47AQ5JRC9 791 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 C16orf59Q7L2K0 433 aa13.56□□□□□ -0.24
SNF8-207ENST00000509995 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms