RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	CNGA1	P29973	690 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	HERVK_113	P62684	666 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	PICALM	Q13492	652 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	MORN1	Q5T089	497 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	GPR142	Q7Z601	462 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	LPAR1	Q92633	364 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	P2RX7	Q99572	595 aa	Known RBP	10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	C1QTNF1	Q9BXJ1	281 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	TBC1D2	Q9BYX2	928 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	PORCN	Q9H237	461 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	DDX4	Q9NQI0	724 aa	Known RBP	10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	PDLIM7	Q9NR12	457 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	SMC4	Q9NTJ3	1288 aa		10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	DDX20	Q9UHI6	824 aa	Known RBP	10.67	□□□□□ -0.7
RACK1-222	ENST00000509535	XIRP2	A4UGR9	3374 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	TRIM43B	A6NCK2	446 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	TBC1D12	O60347	775 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	MSC	O60682	206 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	MRPS5	P82675	430 aa	Known RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	TRIM60	Q495X7	471 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	SH3D19	Q5HYK7	790 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	GJC2	Q5T442	439 aa	Predicted RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	MFSD14C	Q5VZR4	134 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	SLC39A5	Q6ZMH5	540 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	SH3RF1	Q7Z6J0	888 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	PLEKHH3	Q7Z736	793 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	IL27	Q8NEV9	243 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	GAS2L1	Q99501	681 aa	Predicted RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	ZNF576	Q9H609	170 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	BICC1	Q9H694	974 aa	Known RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	RBPJL	Q9UBG7	517 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	RCAN3	Q9UKA8	241 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	HCN4	Q9Y3Q4	1203 aa		10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.66	□□□□□ -0.7
RACK1-222	ENST00000509535	UTY	O14607	1347 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	GAK	O14976	1311 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	USP17L5	A8MUK1	530 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	ALDH1L1	O75891	902 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	SLC5A1	P13866	664 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	HOXA7	P31268	230 aa	Predicted RBP	10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	ERVK-9	P63128	1117 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	ERVK-24	P63145	666 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	MAP2K5	Q13163	448 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	MTMR2	Q13614	643 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535		Q3C1V9	767 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	POTEE	Q6S8J3	1075 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	KLHDC4	Q8TBB5	520 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	EDC3	Q96F86	508 aa	Known RBP	10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	PAGR1	Q9BTK6	254 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	FLRT1	Q9NZU1	646 aa		10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	NOB1	Q9ULX3	412 aa	Known RBP	10.65	□□□□□ -0.7
RACK1-222	ENST00000509535	FOCAD	Q5VW36	1801 aa		10.65	□□□□□ -0.71
RACK1-222	ENST00000509535	SALL1	Q9NSC2	1324 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	KBTBD13	C9JR72	458 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	CAP2	P40123	477 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	EPHB4	P54760	987 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	SNX17	Q15036	470 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	CCDC85B	Q15834	202 aa	Predicted RBP	10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	RABL6	Q3YEC7	729 aa	Predicted RBP	10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	AKNAD1	Q5T1N1	836 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	SLC4A10	Q6U841	1118 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	TIFA	Q96CG3	184 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	NECAB3	Q96P71	396 aa	Predicted RBP	10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	SRCIN1	Q9C0H9	1055 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	AS3MT	Q9HBK9	375 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	CWC22	Q9HCG8	908 aa	Known RBP	10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	TMOD4	Q9NZQ9	345 aa		10.64	□□□□□ -0.71
RACK1-222	ENST00000509535	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	IPO8	O15397	1037 aa	Known RBP	10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	ITGB8	P26012	769 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	BTD	P43251	543 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	BACE1	P56817	501 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	RRP1B	Q14684	758 aa	Known RBP	10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	ATF7IP	Q6VMQ6	1270 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	ANKRD44	Q8N8A2	993 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	ARRDC4	Q8NCT1	418 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	TRPV1	Q8NER1	839 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	LPIN2	Q92539	896 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	LRFN3	Q9BTN0	628 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	API5	Q9BZZ5	524 aa	Known RBP	10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	PRDM12	Q9H4Q4	367 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	NDUFB9	Q9Y6M9	179 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	ZNF236	Q9UL36	1845 aa		10.63	□□□□□ -0.71
RACK1-222	ENST00000509535	GLRX3	O76003	335 aa	Known RBP	10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	MYCN	P04198	464 aa	Predicted RBP	10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	TRIM27	P14373	513 aa		10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	CYP2C19	P33261	490 aa		10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	ADCYAP1R1	P41586	468 aa		10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	ATP2B2	Q01814	1243 aa		10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	TLE2	Q04725	743 aa		10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	WDR78	Q5VTH9	848 aa		10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	DZIP1	Q86YF9	867 aa	Known RBP	10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.62	□□□□□ -0.71
RACK1-222	ENST00000509535	FERMT2	Q96AC1	680 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms