RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 KIF4BQ2VIQ3 1234 aa5.78□□□□□ -1.48
OTUD4-207ENST00000509517 C3orf58Q8NDZ4 430 aa5.78□□□□□ -1.48
OTUD4-207ENST00000509517 DCP1AQ9NPI6 582 aaPredicted RBP5.78□□□□□ -1.48
OTUD4-207ENST00000509517 PPP4R2Q9NY27 417 aa5.78□□□□□ -1.48
OTUD4-207ENST00000509517 CNTNAP4Q9C0A0 1308 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 TCAF2A6NFQ2 919 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 ZNF16P17020 682 aaPredicted RBP5.77□□□□□ -1.49
OTUD4-207ENST00000509517 BMP7P18075 431 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 EIF4BP23588 611 aaKnown RBP5.77□□□□□ -1.49
OTUD4-207ENST00000509517 GSTT1P30711 240 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 XPCQ01831 940 aaPredicted RBP5.77□□□□□ -1.49
OTUD4-207ENST00000509517 ZNF326Q5BKZ1 582 aaKnown RBP5.77□□□□□ -1.49
OTUD4-207ENST00000509517 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
OTUD4-207ENST00000509517 DTHD1Q6ZMT9 781 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 TMC4Q7Z404 712 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 UBE3DQ7Z6J8 389 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.77□□□□□ -1.49
OTUD4-207ENST00000509517 KCNN1Q92952 543 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 ATP13A1Q9HD20 1204 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 FAM8A1Q9UBU6 413 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 AK5Q9Y6K8 562 aa5.77□□□□□ -1.49
OTUD4-207ENST00000509517 USP17L7P0C7H9 530 aa5.76□□□□□ -1.49
OTUD4-207ENST00000509517 GDNFP39905 211 aa5.76□□□□□ -1.49
OTUD4-207ENST00000509517 PSMD2Q13200 908 aa5.76□□□□□ -1.49
OTUD4-207ENST00000509517 AP3B2Q13367 1082 aa5.76□□□□□ -1.49
OTUD4-207ENST00000509517 DDX54Q8TDD1 881 aaKnown RBP5.76□□□□□ -1.49
OTUD4-207ENST00000509517 FAM161BQ96MY7 647 aa5.76□□□□□ -1.49
OTUD4-207ENST00000509517 SEMA3GQ9NS98 782 aa5.76□□□□□ -1.49
OTUD4-207ENST00000509517 RBM47A0AV96 593 aaKnown RBP5.75□□□□□ -1.49
OTUD4-207ENST00000509517 IGF2BP3O00425 579 aaKnown RBP eCLIP5.75□□□□□ -1.49
OTUD4-207ENST00000509517 GLDCP23378 1020 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 ERVFC1P60507 584 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 NFKB2Q00653 900 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 DBX2Q6ZNG2 339 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 STK35Q8TDR2 534 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 HSPA12BQ96MM6 686 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 EPB41L4BQ9H329 900 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 ZCCHC4Q9H5U6 513 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 SSU72Q9NP77 194 aaKnown RBP5.75□□□□□ -1.49
OTUD4-207ENST00000509517 AKAP2Q9Y2D5 859 aa5.75□□□□□ -1.49
OTUD4-207ENST00000509517 PRR33A8MZF0 331 aa5.74□□□□□ -1.49
OTUD4-207ENST00000509517 EOMESO95936 686 aa5.74□□□□□ -1.49
OTUD4-207ENST00000509517 ANKRD24Q8TF21 1146 aa5.74□□□□□ -1.49
OTUD4-207ENST00000509517 PPM1HQ9ULR3 514 aa5.74□□□□□ -1.49
OTUD4-207ENST00000509517 SORBS3O60504 671 aa5.73□□□□□ -1.49
OTUD4-207ENST00000509517 GSTP1P09211 210 aaKnown RBP5.73□□□□□ -1.49
OTUD4-207ENST00000509517 SKOR2Q2VWA4 1001 aaPredicted RBP5.73□□□□□ -1.49
OTUD4-207ENST00000509517 KCNC2Q96PR1 638 aa5.73□□□□□ -1.49
OTUD4-207ENST00000509517 MRS2Q9HD23 443 aa5.73□□□□□ -1.49
OTUD4-207ENST00000509517 PRDM10Q9NQV6 1147 aa5.73□□□□□ -1.49
OTUD4-207ENST00000509517 GTF2IRD1Q9UHL9 959 aa5.73□□□□□ -1.49
OTUD4-207ENST00000509517 GPN3Q9UHW5 284 aaPredicted RBP5.73□□□□□ -1.49
OTUD4-207ENST00000509517 CTSHP09668 335 aa5.72□□□□□ -1.49
OTUD4-207ENST00000509517 MRPL58Q14197 206 aaKnown RBP5.72□□□□□ -1.49
OTUD4-207ENST00000509517 ZC3H12AQ5D1E8 599 aaKnown RBP5.72□□□□□ -1.49
OTUD4-207ENST00000509517 MPRIPQ6WCQ1 1025 aa5.72□□□□□ -1.49
OTUD4-207ENST00000509517 PDZD3Q86UT5 571 aa5.72□□□□□ -1.49
OTUD4-207ENST00000509517 TMEM39AQ9NV64 488 aa5.72□□□□□ -1.49
OTUD4-207ENST00000509517 VTI1BQ9UEU0 232 aa5.72□□□□□ -1.49
OTUD4-207ENST00000509517 FBXO24O75426 580 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 NTF4P34130 210 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 ITGAEP38570 1179 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 TPTE2Q6XPS3 522 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 RNF214Q8ND24 703 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 KCNB2Q92953 911 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 CRELD1Q96HD1 420 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 NECAB3Q96P71 396 aaPredicted RBP5.71□□□□□ -1.5
OTUD4-207ENST00000509517 CEP44Q9C0F1 390 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 TTF2Q9UNY4 1162 aaKnown RBP5.71□□□□□ -1.5
OTUD4-207ENST00000509517 CSADQ9Y600 493 aa5.71□□□□□ -1.5
OTUD4-207ENST00000509517 ENC1O14682 589 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 SYN1P17600 705 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 CLCN7P51798 805 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 PPP2R3AQ06190 1150 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 MEI1Q5TIA1 1274 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 CDKAL1Q5VV42 579 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 MARCH10Q8NA82 808 aaPredicted RBP5.7□□□□□ -1.5
OTUD4-207ENST00000509517 ABHD4Q8TB40 342 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 KRT82Q9NSB4 513 aa5.7□□□□□ -1.5
OTUD4-207ENST00000509517 DNAJC25-GNG10A0A024R161 153 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 H3BS24 57 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 TRIM13O60858 407 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 CELA3AP09093 270 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 TRHRP34981 398 aaPredicted RBP5.69□□□□□ -1.5
OTUD4-207ENST00000509517 ST13P50502 369 aaKnown RBP5.69□□□□□ -1.5
OTUD4-207ENST00000509517 PPM1JQ5JR12 505 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 RALGPS1Q5JS13 557 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 BCL11AQ9H165 835 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 TMPRSS5Q9H3S3 457 aa5.69□□□□□ -1.5
OTUD4-207ENST00000509517 USP31Q70CQ4 1352 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 ADAMTS20P59510 1910 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 UNCXA6NJT0 531 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 GNAT3A8MTJ3 354 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 PAGE1O75459 146 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 NME2P22392 152 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 NFIXQ14938 502 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 TAF1CQ15572 869 aaPredicted RBP5.68□□□□□ -1.5
OTUD4-207ENST00000509517 SV2BQ7L1I2 683 aa5.68□□□□□ -1.5
OTUD4-207ENST00000509517 PRRT2Q7Z6L0 340 aaPredicted RBP5.68□□□□□ -1.5
OTUD4-207ENST00000509517 TTC6Q86TZ1 520 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms