RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ELNP15502 786 aa18.71■□□□□ 0.59
TPM3-219ENST00000509409 JAG1P78504 1218 aa18.71■□□□□ 0.59
TPM3-219ENST00000509409 TTF1Q15361 905 aaPredicted RBP18.71■□□□□ 0.59
TPM3-219ENST00000509409 KIF1BPQ96EK5 621 aa18.71■□□□□ 0.59
TPM3-219ENST00000509409 DOCK1Q14185 1865 aa18.71■□□□□ 0.59
TPM3-219ENST00000509409 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
TPM3-219ENST00000509409 GJA8P48165 433 aa18.7■□□□□ 0.58
TPM3-219ENST00000509409 IRF5Q13568 498 aa18.7■□□□□ 0.58
TPM3-219ENST00000509409 SHROOM1Q2M3G4 852 aaPredicted RBP18.7■□□□□ 0.58
TPM3-219ENST00000509409 DPF3Q92784 378 aa18.7■□□□□ 0.58
TPM3-219ENST00000509409 UNC93B1Q9H1C4 597 aa18.7■□□□□ 0.58
TPM3-219ENST00000509409 CHMP4BQ9H444 224 aaKnown RBP18.7■□□□□ 0.58
TPM3-219ENST00000509409 BRCA2P51587 3418 aa18.7■□□□□ 0.58
TPM3-219ENST00000509409 INHAP05111 366 aa18.69■□□□□ 0.58
TPM3-219ENST00000509409 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
TPM3-219ENST00000509409 TMED8Q6PL24 325 aaPredicted RBP18.69■□□□□ 0.58
TPM3-219ENST00000509409 TTC6Q86TZ1 520 aa18.69■□□□□ 0.58
TPM3-219ENST00000509409 PXYLP1Q8TE99 480 aa18.69■□□□□ 0.58
TPM3-219ENST00000509409 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
TPM3-219ENST00000509409 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
TPM3-219ENST00000509409 ZBTB21Q9ULJ3 1066 aa18.69■□□□□ 0.58
TPM3-219ENST00000509409 MAGEB6P1A0A0J9YX57 407 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 RAB11FIP3O75154 756 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 GH2P01242 217 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 TFRCP02786 760 aaKnown RBP18.68■□□□□ 0.58
TPM3-219ENST00000509409 POLR3DP05423 398 aaPredicted RBP18.68■□□□□ 0.58
TPM3-219ENST00000509409 HABP4Q5JVS0 413 aaKnown RBP18.68■□□□□ 0.58
TPM3-219ENST00000509409 SLC9C2Q5TAH2 1124 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 U2AF1L4Q8WU68 220 aaKnown RBP18.68■□□□□ 0.58
TPM3-219ENST00000509409 SHISA4Q96DD7 197 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 SERPINB13Q9UIV8 391 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 RCAN3Q9UKA8 241 aa18.68■□□□□ 0.58
TPM3-219ENST00000509409 GOLIM4O00461 696 aa18.67■□□□□ 0.58
TPM3-219ENST00000509409 SGPL1O95470 568 aa18.67■□□□□ 0.58
TPM3-219ENST00000509409 HOXA7P31268 230 aaPredicted RBP18.67■□□□□ 0.58
TPM3-219ENST00000509409 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
TPM3-219ENST00000509409 USP17L2Q6R6M4 530 aa18.67■□□□□ 0.58
TPM3-219ENST00000509409 RBBP6Q7Z6E9 1792 aaKnown RBP18.67■□□□□ 0.58
TPM3-219ENST00000509409 PHIPQ8WWQ0 1821 aa18.66■□□□□ 0.58
TPM3-219ENST00000509409 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
TPM3-219ENST00000509409 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
TPM3-219ENST00000509409 SIRT2Q8IXJ6 389 aa18.66■□□□□ 0.58
TPM3-219ENST00000509409 GPRC5AQ8NFJ5 357 aa18.66■□□□□ 0.58
TPM3-219ENST00000509409 FEZ1Q99689 392 aa18.66■□□□□ 0.58
TPM3-219ENST00000509409 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
TPM3-219ENST00000509409 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
TPM3-219ENST00000509409 PDE6AP16499 860 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 HERVK_113P62684 666 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 ZYXQ15942 572 aaKnown RBP18.65■□□□□ 0.58
TPM3-219ENST00000509409 ABCB5Q2M3G0 1257 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 TATDN1Q6P1N9 297 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
TPM3-219ENST00000509409 DEFB118Q96PH6 123 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 RIOK1Q9BRS2 568 aaKnown RBP18.65■□□□□ 0.58
TPM3-219ENST00000509409 HTATIP2Q9BUP3 242 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 EHD4Q9H223 541 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 EMILIN3Q9NT22 766 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 MORF4L1Q9UBU8 362 aa18.65■□□□□ 0.58
TPM3-219ENST00000509409 H0YGN5 161 aa18.64■□□□□ 0.57
TPM3-219ENST00000509409 FARP2O94887 1054 aaPredicted RBP18.64■□□□□ 0.57
TPM3-219ENST00000509409 PLCD1P51178 756 aa18.64■□□□□ 0.57
TPM3-219ENST00000509409 PAGR1Q9BTK6 254 aa18.64■□□□□ 0.57
TPM3-219ENST00000509409 BOLA2Q9H3K6 86 aa18.64■□□□□ 0.57
TPM3-219ENST00000509409 CWC22Q9HCG8 908 aaKnown RBP18.64■□□□□ 0.57
TPM3-219ENST00000509409 GJD2Q9UKL4 321 aa18.64■□□□□ 0.57
TPM3-219ENST00000509409 ZNF532Q9HCE3 1301 aa18.64■□□□□ 0.57
TPM3-219ENST00000509409 PEX10O60683 326 aa18.63■□□□□ 0.57
TPM3-219ENST00000509409 USP14P54578 494 aa18.63■□□□□ 0.57
TPM3-219ENST00000509409 MCM9Q9NXL9 1143 aa18.63■□□□□ 0.57
TPM3-219ENST00000509409 MAST2Q6P0Q8 1798 aa18.63■□□□□ 0.57
TPM3-219ENST00000509409 CYP2B6P20813 491 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 Q3C1V9 767 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
TPM3-219ENST00000509409 EDC3Q96F86 508 aaKnown RBP18.62■□□□□ 0.57
TPM3-219ENST00000509409 NUDT12Q9BQG2 462 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 TXNRD2Q9NNW7 524 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 PAG1Q9NWQ8 432 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 RBPJLQ9UBG7 517 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 COLQQ9Y215 455 aaPredicted RBP18.62■□□□□ 0.57
TPM3-219ENST00000509409 PTPRFP10586 1907 aa18.62■□□□□ 0.57
TPM3-219ENST00000509409 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
TPM3-219ENST00000509409 HMGCRP04035 888 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 CAPN2P17655 700 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 ERVK-9P63128 1117 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 ERVK-24P63145 666 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 PDE3AQ14432 1141 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 PCDH10Q9P2E7 1040 aa18.61■□□□□ 0.57
TPM3-219ENST00000509409 MYO5AQ9Y4I1 1855 aaKnown RBP18.6■□□□□ 0.57
TPM3-219ENST00000509409 MAPK4P31152 587 aa18.6■□□□□ 0.57
TPM3-219ENST00000509409 SHMT1P34896 483 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms