RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
PHF3-209ENST00000509330 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 ATP6V0A2Q9Y487 856 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 WDHD1O75717 1129 aaPredicted RBP17.23■□□□□ 0.35
PHF3-209ENST00000509330 PTMAP06454 111 aaKnown RBP17.23■□□□□ 0.35
PHF3-209ENST00000509330 IL1R1P14778 569 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 GSTO1P78417 241 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 SNW1Q13573 536 aaKnown RBP17.23■□□□□ 0.35
PHF3-209ENST00000509330 C12orf60Q5U649 245 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 SHISA4Q96DD7 197 aa17.23■□□□□ 0.35
PHF3-209ENST00000509330 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 ESPNB1AK53 854 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 TROAPQ12815 778 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 MRPS27Q92552 414 aaKnown RBP17.22■□□□□ 0.35
PHF3-209ENST00000509330 SLURP2P0DP57 97 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
PHF3-209ENST00000509330 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 DEXIO95424 95 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
PHF3-209ENST00000509330 MKRN1Q9UHC7 482 aaKnown RBP17.22■□□□□ 0.35
PHF3-209ENST00000509330 AP5Z1O43299 807 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 ADCY5O95622 1261 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 MMP1P03956 469 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 TSPY3P0CV98 308 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 TSPY8P0CW00 308 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 NPR1P16066 1061 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 SAFBQ15424 915 aaKnown RBP eCLIP17.21■□□□□ 0.35
PHF3-209ENST00000509330 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 KLRG2A4D1S0 409 aaPredicted RBP17.21■□□□□ 0.35
PHF3-209ENST00000509330 LDHCP07864 332 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.35
PHF3-209ENST00000509330 ISM2Q6H9L7 571 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
PHF3-209ENST00000509330 KCNG4Q8TDN1 519 aa17.21■□□□□ 0.35
PHF3-209ENST00000509330 RGS17Q9UGC6 210 aaPredicted RBP17.21■□□□□ 0.35
PHF3-209ENST00000509330 SRCAPQ6ZRS2 3230 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
PHF3-209ENST00000509330 CPVLQ9H3G5 476 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 ORC4O43929 436 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 NOSTRINQ8IVI9 506 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 WASF1Q92558 559 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
PHF3-209ENST00000509330 CABP5Q9NP86 173 aa17.2■□□□□ 0.34
PHF3-209ENST00000509330 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
PHF3-209ENST00000509330 BIN1O00499 593 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 FGRP09769 529 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 PDE6BP35913 854 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 SBK1Q52WX2 424 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 RCSD1Q6JBY9 416 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 C15orf52Q6ZUT6 534 aaKnown RBP17.19■□□□□ 0.34
PHF3-209ENST00000509330 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
PHF3-209ENST00000509330 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
PHF3-209ENST00000509330 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 PCDHAC2Q9Y5I4 1007 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 FLT1P17948 1338 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 STK36Q9NRP7 1315 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 PKN1Q16512 942 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 EARS2Q5JPH6 523 aaKnown RBP17.19■□□□□ 0.34
PHF3-209ENST00000509330 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 ENGASEQ8NFI3 743 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 CBX8Q9HC52 389 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 DAGLAQ9Y4D2 1042 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 MYH15Q9Y2K3 1946 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 YEATS4O95619 227 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 GRIN1Q05586 938 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 MASTLQ96GX5 879 aa17.19■□□□□ 0.34
PHF3-209ENST00000509330 U2AF2P26368 475 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHF3-209ENST00000509330 CACNB3P54284 484 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 EIF6P56537 245 aaKnown RBP17.18■□□□□ 0.34
PHF3-209ENST00000509330 C11orf57Q6ZUT1 292 aaPredicted RBP17.18■□□□□ 0.34
PHF3-209ENST00000509330 PCDHB6Q9Y5E3 794 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 ECM29Q5VYK3 1845 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 PFKFB1P16118 471 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
PHF3-209ENST00000509330 RHBDL3P58872 404 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 SLC39A14Q15043 492 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
PHF3-209ENST00000509330 PNMA1Q8ND90 353 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 FAM200AQ8TCP9 573 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 ANKRD31Q8N7Z5 1873 aa17.18■□□□□ 0.34
PHF3-209ENST00000509330 GPR75-ASB3A0A0A6YYF3 556 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 ADAMTS3O15072 1205 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 ALDH1B1P30837 517 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms