RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 TAF1DQ9H5J8 278 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
SNCAIP-211ENST00000509023 MYH8P13535 1937 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 SH2B2O14492 632 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 SART3Q15020 963 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 IGDCC4Q8TDY8 1250 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 TEPSINQ96N21 525 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 PITPNM2Q9BZ72 1349 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 ANGEL1Q9UNK9 670 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-211ENST00000509023 TNKSO95271 1327 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 TMEM67Q5HYA8 995 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 MTA3Q9BTC8 594 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 DAXXQ9UER7 740 aaPredicted RBP17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 HERC5Q9UII4 1024 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 ERICH2A1L162 156 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 NMT2O60551 498 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 APOBRQ0VD83 1088 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
SNCAIP-211ENST00000509023 EAPPQ56P03 285 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-211ENST00000509023 TATDN1Q6P1N9 297 aa17.43■□□□□ 0.38
SNCAIP-211ENST00000509023 DCPSQ96C86 337 aaKnown RBP17.43■□□□□ 0.38
SNCAIP-211ENST00000509023 SENP2Q9HC62 589 aa17.43■□□□□ 0.38
SNCAIP-211ENST00000509023 LARGE1O95461 756 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 AKR1B1P15121 316 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 WTAPQ15007 396 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 ME3Q16798 604 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 MIGA2Q7L4E1 593 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 PPP2R3BQ9Y5P8 575 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 TBC1D12O60347 775 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 LIFRP42702 1097 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 SEC23AQ15436 765 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 ENAHQ8N8S7 591 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
SNCAIP-211ENST00000509023 PLIN4Q96Q06 1357 aa17.41■□□□□ 0.38
SNCAIP-211ENST00000509023 PRAMEF18Q5VWM3 479 aa17.41■□□□□ 0.38
SNCAIP-211ENST00000509023 NFXL1Q6ZNB6 911 aa17.41■□□□□ 0.38
SNCAIP-211ENST00000509023 ZC3H15Q8WU90 426 aaKnown RBP17.41■□□□□ 0.38
SNCAIP-211ENST00000509023 TCP11L1Q9NUJ3 509 aa17.41■□□□□ 0.38
SNCAIP-211ENST00000509023 POLR2AP24928 1970 aaKnown RBP17.41■□□□□ 0.38
SNCAIP-211ENST00000509023 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 EVCP57679 992 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 SGMS1Q86VZ5 419 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 CCDC17Q96LX7 622 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 CCDC69A6NI79 296 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 MAP3K10Q02779 954 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 STK3Q13188 491 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 TMTC2Q8N394 836 aa17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNCAIP-211ENST00000509023 ADM5C9JUS6 153 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 GDF11O95390 407 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 RRP1BQ14684 758 aaKnown RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 RCSD1Q6JBY9 416 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 KRT26Q7Z3Y9 468 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 DGKHQ86XP1 1220 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 NECAB1Q8N987 351 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 ZNF526Q8TF50 670 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 CEP95Q96GE4 821 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 STX8Q9UNK0 236 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 SLC12A7Q9Y666 1083 aa17.39■□□□□ 0.37
SNCAIP-211ENST00000509023 GREB1LQ9C091 1923 aaPredicted RBP17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 GOLGA8BA8MQT2 603 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 CUL4AQ13619 759 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 APOA5Q6Q788 366 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 RAB11FIP4Q86YS3 637 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 HOOK2Q96ED9 719 aa17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
SNCAIP-211ENST00000509023 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 POTEJP0CG39 1038 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 ST3GAL1Q11201 340 aa17.37■□□□□ 0.37
SNCAIP-211ENST00000509023 DCAF15Q66K64 600 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms