RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 FLT3P36888 993 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PTK2Q05397 1052 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 DEUP1Q05D60 604 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 DNAJC14Q6Y2X3 702 aaPredicted RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 FMNL2Q96PY5 1086 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 SUPT16HQ9Y5B9 1047 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 KDM3BQ7LBC6 1761 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 KDM2BQ8NHM5 1336 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 RCCD1A6NED2 376 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 HNRNPCL1O60812 293 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 MYBP10242 640 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 GNA15P30679 374 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 EPHB1P54762 984 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 GUCA2AQ02747 115 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 FAM133BQ5BKY9 247 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ABTB2Q8N961 1025 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ADAMTS19Q8TE59 1207 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 RTF1Q92541 710 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 EPAS1Q99814 870 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 IFT122Q9HBG6 1241 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ZRANB1Q9UGI0 708 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 FRMPD2Q68DX3 1309 aaPredicted RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 TTC21BQ7Z4L5 1316 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF26B4DH59 902 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 MAP3K13O43283 966 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 THAP12O43422 761 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 STARD3NLO95772 234 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 LTKP29376 864 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 OAS2P29728 719 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 CLNS1AP54105 237 aaKnown RBP4.48□□□□□ -1.69
NEDD4-209ENST00000508871 UVSSAQ2YD98 709 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF20Q3BBV1 942 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 TMC7Q7Z402 723 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PACS2Q86VP3 889 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ERC1Q8IUD2 1116 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 SAMD3Q8N6K7 520 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 CEP120Q8N960 986 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 PI4K2BQ8TCG2 481 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ARHGAP9Q9BRR9 750 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 ACTR10Q9NZ32 417 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 POLG2Q9UHN1 485 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 TMCC3Q9ULS5 477 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 OVOS2A0A0G2JMS6 1433 aa4.48□□□□□ -1.69
NEDD4-209ENST00000508871 GRK2P25098 689 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 USP46P62068 366 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC173Q0VFZ6 552 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 SMAD1Q15797 465 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 FBF1Q8TES7 1133 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CLP1Q92989 425 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 JAKMIP2Q96AA8 810 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CLIP3Q96DZ5 547 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 SHTN1A0MZ66 631 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 C2orf72A6NCS6 295 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 GOLGA8CPA6NN73 597 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CCNG2Q16589 344 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 LONRF1Q17RB8 773 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 GK5Q6ZS86 529 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 GPR152Q8TDT2 470 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 NUDT16Q96DE0 195 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 YIPF4Q9BSR8 244 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 RABL2AQ9UBK7 228 aaPredicted RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CPLX1O14810 134 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 KPNA6O60684 536 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 PLCG2P16885 1265 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 LMAN1P49257 510 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 KMT5BQ4FZB7 885 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 TAX1BP1Q86VP1 789 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CNDP2Q96KP4 475 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 LBHD1Q9BQE6 289 aaPredicted RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 ZKSCAN5Q9Y2L8 839 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC61Q9Y6R9 512 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 V9GY48 417 aaPredicted RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 COL18A1P39060 1754 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 SPTLC1O15269 473 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 MT-CO1P00395 513 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 MZF1P28698 734 aaPredicted RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 EIF6P56537 245 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 NCAPD2Q15021 1401 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 ARMC3Q5W041 872 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 WAPLQ7Z5K2 1190 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 ADAT2Q7Z6V5 191 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 RELTQ969Z4 430 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 STRN4Q9NRL3 753 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 HAUS2Q9NVX0 235 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 SNTG2Q9NY99 539 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 KLF15Q9UIH9 416 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 ARHGAP26Q9UNA1 814 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 DNMT3AQ9Y6K1 912 aaPredicted RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 CACNA1FO60840 1977 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 SLU7O95391 586 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 U2AF1L5P0DN76 240 aaPredicted RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 AMPHP49418 695 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 SCNN1BP51168 640 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 U2AF1Q01081 240 aaKnown RBP eCLIP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 USP4Q13107 963 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 PTPN14Q15678 1187 aa4.47□□□□□ -1.69
NEDD4-209ENST00000508871 PUS10Q3MIT2 529 aaKnown RBP4.47□□□□□ -1.69
NEDD4-209ENST00000508871 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms