RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-227ENST00000508852 TREML2Q5T2D2 321 aa16.51■□□□□ 0.23
CCHCR1-227ENST00000508852 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
CCHCR1-227ENST00000508852 SERPINB13Q9UIV8 391 aa16.51■□□□□ 0.23
CCHCR1-227ENST00000508852 SLURP2P0DP57 97 aa16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 CCL5P13501 91 aa16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 FLT3LGP49771 235 aa16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 PDE3AQ14432 1141 aa16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 RNF208Q9H0X6 261 aa16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
CCHCR1-227ENST00000508852 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 ECM2O94769 699 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 USP14P54578 494 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 MTMR2Q13614 643 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 CRNKL1Q9BZJ0 848 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 CABP5Q9NP86 173 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 MORF4L1Q9UBU8 362 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
CCHCR1-227ENST00000508852 BRCA2P51587 3418 aa16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 MYCP01106 439 aaPredicted RBP16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 RRP1BQ14684 758 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 MTFR1Q15390 333 aa16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 HTATIP2Q9BUP3 242 aa16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.232e-6■■■■□ 26
CCHCR1-227ENST00000508852 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 GABRQQ9UN88 632 aa16.48■□□□□ 0.23
CCHCR1-227ENST00000508852 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-227ENST00000508852 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-227ENST00000508852 GPRC5AQ8NFJ5 357 aa16.47■□□□□ 0.23
CCHCR1-227ENST00000508852 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
CCHCR1-227ENST00000508852 GDF11O95390 407 aa16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 PDE6AP16499 860 aa16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 C12orf42Q96LP6 360 aa16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 DOCK3Q8IZD9 2030 aa16.46■□□□□ 0.23
CCHCR1-227ENST00000508852 MKI67P46013 3256 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 SGPL1O95470 568 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 GH2P01242 217 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 INHAP05111 366 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 ATP5JP18859 108 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 MAPK4P31152 587 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 HERVK_113P62684 666 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 ZSCAN25Q6NSZ9 544 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 AMOTL1Q8IY63 956 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 U2AF1L4Q8WU68 220 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 FEZ1Q99689 392 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 NAV1Q8NEY1 1877 aa16.45■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 APBB1O00213 710 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 GOLIM4O00461 696 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 HMGCRP04035 888 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 CCNA1P78396 465 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 ATP8A2Q9NTI2 1148 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 NDUFB9Q9Y6M9 179 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
CCHCR1-227ENST00000508852 TFRCP02786 760 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 XRCC5P13010 732 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 SHISA4Q96DD7 197 aa16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 UNC93B1Q9H1C4 597 aa16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 PAK6Q9NQU5 681 aaPredicted RBP16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 MCM9Q9NXL9 1143 aa16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
CCHCR1-227ENST00000508852 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 ELNP15502 786 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 ANKLE1Q8NAG6 615 aa16.42■□□□□ 0.22
CCHCR1-227ENST00000508852 DPF3Q92784 378 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms