RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 PTPN18Q99952 460 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 ZHX2Q9Y6X8 837 aa12.7□□□□□ -0.38
POLR2J3-213ENST00000508848 A0A0G2JLL6 359 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 PRKAB2O43741 272 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 NEFLP07196 543 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 SDSP20132 328 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 SLFNL1Q499Z3 407 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 CTR9Q6PD62 1173 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 C16orf86Q6ZW13 317 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 PRRT2Q7Z6L0 340 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 ZNF280CQ8ND82 737 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 BRI3BPQ8WY22 251 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 ZNF287Q9HBT7 754 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
POLR2J3-213ENST00000508848 ZMYM6O95789 1325 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 TRIM6-TRIM34B2RNG4 842 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 TRPA1O75762 1119 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 CHGBP05060 677 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 SHMT1P34896 483 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 MOGSQ13724 837 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 RRP1BQ14684 758 aaKnown RBP12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
POLR2J3-213ENST00000508848 CCL15-CCL14A0A0B4J2E2 113 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 M0R2C6 588 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 PCP11498 1178 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 BACE1P56817 501 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 CCL15Q16663 113 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
POLR2J3-213ENST00000508848 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 FGRP09769 529 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 CDK8P49336 464 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 LBX1P52954 281 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 ABCB5Q2M3G0 1257 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 GPAT2Q6NUI2 795 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 RILPL2Q969X0 211 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 CCDC136Q96JN2 1154 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 KIAA1683Q9H0B3 1180 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 ZFYVE28Q9HCC9 887 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 SYNPO2Q9UMS6 1093 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
POLR2J3-213ENST00000508848 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 GPR25O00155 361 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 TLR2O60603 784 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 SLC3A2P08195 630 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 SLURP2P0DP57 97 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 USP14P54578 494 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 MKRN3Q13064 507 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 SPP2Q13103 211 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 RUFY2Q8WXA3 655 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 C12orf42Q96LP6 360 aa12.65□□□□□ -0.38
POLR2J3-213ENST00000508848 CCDC171Q6TFL3 1326 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 GREB1LQ9C091 1923 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 FOXP2O15409 715 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 GH2P01242 217 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 APPP05067 770 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 JAG1P78504 1218 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 ARHGEF6Q15052 776 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 PKN2Q16513 984 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 BMP2KLQ5H9B9 411 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 NAPBQ9H115 298 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 DIAPH3Q9NSV4 1193 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 AGTPBP1Q9UPW5 1226 aa12.64□□□□□ -0.39
POLR2J3-213ENST00000508848 RAD50Q92878 1312 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 PDHXO00330 501 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 GNRH1P01148 92 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 FGAP02671 866 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 TDO2P48775 406 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 PDE4BQ07343 736 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 CRHR2Q13324 411 aa12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 TAF1CQ15572 869 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-213ENST00000508848 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms