RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580	PHC3	Q8NDX5	983 aa		6.33	□□□□□ -1.4
DDX4-208	ENST00000508580	MIPEP	Q99797	713 aa		6.33	□□□□□ -1.4
DDX4-208	ENST00000508580	NOC4L	Q9BVI4	516 aa	Known RBP	6.33	□□□□□ -1.4
DDX4-208	ENST00000508580	MIR1-1HG	Q9H1L0	117 aa		6.33	□□□□□ -1.4
DDX4-208	ENST00000508580	TJP2	Q9UDY2	1190 aa		6.33	□□□□□ -1.4
DDX4-208	ENST00000508580	GNAT3	A8MTJ3	354 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	ST13	P50502	369 aa	Known RBP	6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	TSNAXIP1	Q2TAA8	658 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	CDKAL1	Q5VV42	579 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	LETMD1	Q6P1Q0	360 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	CDH24	Q86UP0	819 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	ASB11	Q8WXH4	323 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	HSPA12B	Q96MM6	686 aa		6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	RC3H2	Q9HBD1	1191 aa	Known RBP	6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	TPX2	Q9ULW0	747 aa	Known RBP	6.32	□□□□□ -1.4
DDX4-208	ENST00000508580	CBX7	O95931	251 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	PGR	P06401	933 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	RLBP1	P12271	317 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	ZP2	Q05996	745 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	SFRP5	Q5T4F7	317 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	ANGEL2	Q5VTE6	544 aa	Known RBP	6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	OGFOD2	Q6N063	350 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	SLC23A3	Q6PIS1	610 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	ATG4D	Q86TL0	474 aa	Predicted RBP	6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	LRRN4CL	Q8ND94	238 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	DPH2	Q9BQC3	489 aa	Predicted RBP	6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	SEMA3G	Q9NS98	782 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	MAPK8IP1	Q9UQF2	711 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	CORIN	Q9Y5Q5	1042 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	TACC3	Q9Y6A5	838 aa		6.31	□□□□□ -1.4
DDX4-208	ENST00000508580	UPK3BL1	B0FP48	263 aa		6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	FAM155A	B1AL88	458 aa	Predicted RBP	6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	UPK3BL2	E5RIL1	263 aa		6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	SORBS3	O60504	671 aa		6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	RPL6	Q02878	288 aa	Known RBP	6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	IKZF1	Q13422	519 aa		6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	CAMK2G	Q13555	558 aa	Predicted RBP	6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	MCAT	Q8IVS2	390 aa	Known RBP	6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	ATP13A1	Q9HD20	1204 aa		6.3	□□□□□ -1.4
DDX4-208	ENST00000508580	PITPNM2	Q9BZ72	1349 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	FAM221A	A4D161	298 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	BIN1	O00499	593 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	PF4	P02776	101 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	CCDC27	Q2M243	656 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	SLC6A19	Q695T7	634 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	MRPL41	Q8IXM3	137 aa	Known RBP	6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	ACSF2	Q96CM8	615 aa	Predicted RBP	6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	TMEM87B	Q96K49	555 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	CCDC9	Q9Y3X0	531 aa	Known RBP	6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	ST14	Q9Y5Y6	855 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	CAPN6	Q9Y6Q1	641 aa		6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.29	□□□□□ -1.4
DDX4-208	ENST00000508580	MINDY4B	A8MYZ0	360 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	CILP	O75339	1184 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	F13A1	P00488	732 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	CLCN7	P51798	805 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	CCDC84	Q86UT8	332 aa	Predicted RBP	6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	RELL1	Q8IUW5	271 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	UBE2F	Q969M7	185 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	RSRP1	Q9BUV0	290 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	LMCD1	Q9NZU5	365 aa		6.28	□□□□□ -1.4
DDX4-208	ENST00000508580	ZBTB7C	A1YPR0	619 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	WASH4P	A8MWX3	477 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580		H3BS24	57 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	GBP2	P32456	591 aa	Predicted RBP	6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	LMNB2	Q03252	620 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	C22orf34	Q6ZV56	151 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	MFSD4A	Q8N468	514 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	TMEM74	Q96NL1	305 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	ZSWIM5	Q9P217	1185 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	VTI1B	Q9UEU0	232 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	CEP131	Q9UPN4	1083 aa		6.27	□□□□□ -1.41
DDX4-208	ENST00000508580	ERCC3	P19447	782 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	PDE4B	Q07343	736 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	TNK2	Q07912	1038 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	FYB2	Q5VWT5	728 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	PPP1R13L	Q8WUF5	828 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	GATAD2B	Q8WXI9	593 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	FAM168A	Q92567	244 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	CRELD1	Q96HD1	420 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	CARS2	Q9HA77	564 aa	Known RBP	6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	MRS2	Q9HD23	443 aa		6.26	□□□□□ -1.41
DDX4-208	ENST00000508580	YBX3	P16989	372 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	PLCG1	P19174	1290 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	CYP7A1	P22680	504 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	FAM160A1	Q05DH4	1040 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	POU5F2	Q8N7G0	328 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	DNAJB8	Q8NHS0	232 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	RHOV	Q96L33	236 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	KRTAP9-9	Q9BYP9	154 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	KRTAP9-4	Q9BYQ2	154 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	COPRS	Q9NQ92	184 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	ADAM30	Q9UKF2	790 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	CTNND2	Q9UQB3	1225 aa		6.25	□□□□□ -1.41
DDX4-208	ENST00000508580	CHURC1-FNTB	B4DL54	471 aa		6.24	□□□□□ -1.41
DDX4-208	ENST00000508580	TMEM201	Q5SNT2	666 aa		6.24	□□□□□ -1.41
DDX4-208	ENST00000508580	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.24	□□□□□ -1.41
DDX4-208	ENST00000508580	GOLM1	Q8NBJ4	401 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms