RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LMNB1P20700 586 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 FGD1P98174 961 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 ZNF124Q15973 351 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 MAP3K11Q16584 847 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 SFRP5Q5T4F7 317 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 CDKAL1Q5VV42 579 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 HID1Q8IV36 788 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 MFSD2AQ8NA29 543 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 RIN3Q8TB24 985 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 XAGE3Q8WTP9 111 aa7.11□□□□□ -1.27
PDLIM5-211ENST00000508531 FARP2O94887 1054 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 GRK4P32298 578 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 CAP2P40123 477 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 PRAMEF13Q5VWM6 474 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 ZSWIM9Q86XI8 627 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 MFSD4AQ8N468 514 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 DUSP9Q99956 384 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 CARS2Q9HA77 564 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 SEMA3GQ9NS98 782 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 CTNND2Q9UQB3 1225 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 AK5Q9Y6K8 562 aa7.1□□□□□ -1.27
PDLIM5-211ENST00000508531 H3BS24 57 aa7.09□□□□□ -1.27
PDLIM5-211ENST00000508531 ZNF865P0CJ78 1059 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-211ENST00000508531 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-211ENST00000508531 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
PDLIM5-211ENST00000508531 MYO15BQ96JP2 1530 aa7.09□□□□□ -1.27
PDLIM5-211ENST00000508531 PATL2C9JE40 543 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 GFRA2O00451 464 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 CBX7O95931 251 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 CST3P01034 146 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 LIG3P49916 1009 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 EAPPQ56P03 285 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 C22orf34Q6ZV56 151 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 DPH2Q9BQC3 489 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 LMCD1Q9NZU5 365 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 CAPN6Q9Y6Q1 641 aa7.08□□□□□ -1.28
PDLIM5-211ENST00000508531 ANKRD33BA6NCL7 494 aa7.07□□□□□ -1.28
PDLIM5-211ENST00000508531 AGMOQ6ZNB7 445 aa7.07□□□□□ -1.28
PDLIM5-211ENST00000508531 KSR1Q8IVT5 923 aa7.07□□□□□ -1.28
PDLIM5-211ENST00000508531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDLIM5-211ENST00000508531 ST14Q9Y5Y6 855 aa7.07□□□□□ -1.28
PDLIM5-211ENST00000508531 ZNF503-AS2A6NEH8 195 aa7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 LRRC10BA6NIK2 292 aa7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 PGRP06401 933 aa7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 FYB2Q5VWT5 728 aa7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 CDH24Q86UP0 819 aa7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 TJP2Q9UDY2 1190 aa7.06□□□□□ -1.28
PDLIM5-211ENST00000508531 ARID1BQ8NFD5 2236 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 TFE3P19532 575 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 AFMP43652 599 aa7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 PKN1Q16512 942 aa7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 MLANAQ16655 118 aa7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 NPAS4Q8IUM7 802 aa7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 MIR1-1HGQ9H1L0 117 aa7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 TLR6Q9Y2C9 796 aa7.05□□□□□ -1.28
PDLIM5-211ENST00000508531 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 TNK2Q07912 1038 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 MESP2Q0VG99 397 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 SND1Q7KZF4 910 aaKnown RBP eCLIP7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 JARID2Q92833 1246 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 UBE2FQ969M7 185 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 LIN37Q96GY3 246 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 TMEM87BQ96K49 555 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 SLC38A3Q99624 504 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 ZSWIM5Q9P217 1185 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 TACC3Q9Y6A5 838 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 NESP48681 1621 aa7.04□□□□□ -1.28
PDLIM5-211ENST00000508531 DBX1A6NMT0 343 aa7.03□□□□□ -1.28
PDLIM5-211ENST00000508531 CYP7A1P22680 504 aa7.03□□□□□ -1.28
PDLIM5-211ENST00000508531 THAP5Q7Z6K1 395 aa7.03□□□□□ -1.28
PDLIM5-211ENST00000508531 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-211ENST00000508531 KIRREL1Q96J84 757 aa7.03□□□□□ -1.28
PDLIM5-211ENST00000508531 KIR3DL1P43629 444 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 PSMD2Q13200 908 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 TSNAXIP1Q2TAA8 658 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 SLC6A19Q695T7 634 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 AEBP1Q8IUX7 1158 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 FAM84AQ96KN4 292 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 FAM53CQ9NYF3 392 aa7.02□□□□□ -1.29
PDLIM5-211ENST00000508531 F6X3S4 739 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 GLI1P08151 1106 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 GDNFP39905 211 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 DAB2P98082 770 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 RPL6Q02878 288 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 PDE4BQ07343 736 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 MPZL3Q6UWV2 235 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 MCATQ8IVS2 390 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 ACSF2Q96CM8 615 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 COX4I2Q96KJ9 171 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 FAM161BQ96MY7 647 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 ALPK1Q96QP1 1244 aa7.01□□□□□ -1.29
PDLIM5-211ENST00000508531 SLAMF8Q9P0V8 285 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms