RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 AS3MTQ9HBK9 375 aa21.88■■□□□ 1.09
SKP2-204ENST00000508514 IL1RAPL2Q9NP60 686 aa21.88■■□□□ 1.09
SKP2-204ENST00000508514 COLQQ9Y215 455 aaPredicted RBP21.88■■□□□ 1.09
SKP2-204ENST00000508514 GCLCP48506 637 aaPredicted RBP21.87■■□□□ 1.09
SKP2-204ENST00000508514 NKX2-3Q8TAU0 364 aa21.87■■□□□ 1.09
SKP2-204ENST00000508514 RHPN1Q8TCX5 695 aa21.87■■□□□ 1.09
SKP2-204ENST00000508514 P2RX7Q99572 595 aaKnown RBP21.87■■□□□ 1.09
SKP2-204ENST00000508514 ZBTB21Q9ULJ3 1066 aa21.87■■□□□ 1.09
SKP2-204ENST00000508514 SGPL1O95470 568 aa21.86■■□□□ 1.09
SKP2-204ENST00000508514 HOXA7P31268 230 aaPredicted RBP21.86■■□□□ 1.09
SKP2-204ENST00000508514 CRACR2BQ8N4Y2 399 aaPredicted RBP21.86■■□□□ 1.09
SKP2-204ENST00000508514 TXNRD2Q9NNW7 524 aa21.86■■□□□ 1.09
SKP2-204ENST00000508514 PCDH10Q9P2E7 1040 aa21.86■■□□□ 1.09
SKP2-204ENST00000508514 MORF4L1Q9UBU8 362 aa21.86■■□□□ 1.09
SKP2-204ENST00000508514 TATDN1Q6P1N9 297 aa21.85■■□□□ 1.09
SKP2-204ENST00000508514 ERC1Q8IUD2 1116 aa21.85■■□□□ 1.09
SKP2-204ENST00000508514 COA7Q96BR5 231 aa21.85■■□□□ 1.09
SKP2-204ENST00000508514 RIOK1Q9BRS2 568 aaKnown RBP21.85■■□□□ 1.09
SKP2-204ENST00000508514 PAK6Q9NQU5 681 aaPredicted RBP21.85■■□□□ 1.09
SKP2-204ENST00000508514 EMILIN3Q9NT22 766 aa21.85■■□□□ 1.09
SKP2-204ENST00000508514 PABPC4Q13310 644 aaKnown RBP eCLIP21.84■■□□□ 1.09
SKP2-204ENST00000508514 GINM1Q9NU53 330 aa21.84■■□□□ 1.09
SKP2-204ENST00000508514 ZBTB40Q9NUA8 1239 aa21.84■■□□□ 1.09
SKP2-204ENST00000508514 C19orf81C9J6K1 198 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 USP17L10C9JJH3 530 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 GH2P01242 217 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 EVX2Q03828 476 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 DEFB118Q96PH6 123 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 RBPJLQ9UBG7 517 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 TAOK2Q9UL54 1235 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
SKP2-204ENST00000508514 CEP290O15078 2479 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 HLA-DOAP06340 250 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 USP5P45974 858 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 FXR1P51114 621 aaKnown RBP eCLIP21.82■■□□□ 1.08
SKP2-204ENST00000508514 PLCD1P51178 756 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 MAP3K12Q12852 859 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 TRIM32Q13049 653 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 Q3C1V9 767 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 DPF3Q92784 378 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 CRISPLD2Q9H0B8 497 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 TMOD4Q9NZQ9 345 aa21.82■■□□□ 1.08
SKP2-204ENST00000508514 APBB1O00213 710 aa21.81■■□□□ 1.08
SKP2-204ENST00000508514 HERVK_113P62684 666 aa21.81■■□□□ 1.08
SKP2-204ENST00000508514 TRIM34Q9BYJ4 488 aa21.81■■□□□ 1.08
SKP2-204ENST00000508514 EHD4Q9H223 541 aa21.81■■□□□ 1.08
SKP2-204ENST00000508514 PLXNB2O15031 1838 aa21.8■■□□□ 1.08
SKP2-204ENST00000508514 FARP2O94887 1054 aaPredicted RBP21.8■■□□□ 1.08
SKP2-204ENST00000508514 IRX3P78415 501 aaPredicted RBP21.8■■□□□ 1.08
SKP2-204ENST00000508514 HSP90AB4PQ58FF6 505 aa21.8■■□□□ 1.08
SKP2-204ENST00000508514 RPAP2Q8IXW5 612 aaPredicted RBP21.8■■□□□ 1.08
SKP2-204ENST00000508514 EDC3Q96F86 508 aaKnown RBP21.8■■□□□ 1.08
SKP2-204ENST00000508514 SERPINB13Q9UIV8 391 aa21.8■■□□□ 1.08
SKP2-204ENST00000508514 RANBP2P49792 3224 aaKnown RBP21.79■■□□□ 1.08
SKP2-204ENST00000508514 MYH1P12882 1939 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 TCRBV5S4A2TA0A5A2 114 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 PDE6AP16499 860 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 GUCY1A2P33402 732 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 SHMT1P34896 483 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 SLFNL1Q499Z3 407 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 CERS3Q8IU89 383 aa21.79■■□□□ 1.08
SKP2-204ENST00000508514 TFRCP02786 760 aaKnown RBP21.78■■□□□ 1.08
SKP2-204ENST00000508514 GABPAQ06546 454 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 SLC9C2Q5TAH2 1124 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 TMED8Q6PL24 325 aaPredicted RBP21.78■■□□□ 1.08
SKP2-204ENST00000508514 USP17L2Q6R6M4 530 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 GPRC5AQ8NFJ5 357 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 ACER1Q8TDN7 264 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.78■■□□□ 1.08
SKP2-204ENST00000508514 TRIB2Q92519 343 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 KIF1BPQ96EK5 621 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 C12orf42Q96LP6 360 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 PORCNQ9H237 461 aa21.78■■□□□ 1.08
SKP2-204ENST00000508514 MAGEB6P1A0A0J9YX57 407 aa21.77■■□□□ 1.08
SKP2-204ENST00000508514 GOLIM4O00461 696 aa21.77■■□□□ 1.08
SKP2-204ENST00000508514 TTC6Q86TZ1 520 aa21.77■■□□□ 1.08
SKP2-204ENST00000508514 CLASRPQ8N2M8 674 aaKnown RBP21.77■■□□□ 1.08
SKP2-204ENST00000508514 USP6NLQ92738 828 aa21.77■■□□□ 1.08
SKP2-204ENST00000508514 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.77■■□□□ 1.08
SKP2-204ENST00000508514 DDX19BQ9UMR2 479 aa21.77■■□□□ 1.08
SKP2-204ENST00000508514 ZNF532Q9HCE3 1301 aa21.77■■□□□ 1.07
SKP2-204ENST00000508514 CNMDO75829 334 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 HMGCRP04035 888 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 CHGBP05060 677 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 MS4A1P11836 297 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 CYP2B6P20813 491 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 MNX1P50219 401 aaPredicted RBP21.76■■□□□ 1.07
SKP2-204ENST00000508514 TTF1Q15361 905 aaPredicted RBP21.76■■□□□ 1.07
SKP2-204ENST00000508514 ZYXQ15942 572 aaKnown RBP21.76■■□□□ 1.07
SKP2-204ENST00000508514 CERKLQ49MI3 558 aaPredicted RBP21.76■■□□□ 1.07
SKP2-204ENST00000508514 DDX60LQ5H9U9 1706 aaKnown RBP21.76■■□□□ 1.07
SKP2-204ENST00000508514 C20orf194Q5TEA3 1177 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 CHRDL2Q6WN34 429 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 DIS3LQ8TF46 1054 aaKnown RBP21.76■■□□□ 1.07
SKP2-204ENST00000508514 PRO3102Q9H379 93 aa21.76■■□□□ 1.07
SKP2-204ENST00000508514 ERVK-9P63128 1117 aa21.75■■□□□ 1.07
SKP2-204ENST00000508514 ERVK-24P63145 666 aa21.75■■□□□ 1.07
SKP2-204ENST00000508514 RAB3GAP1Q15042 981 aa21.75■■□□□ 1.07
SKP2-204ENST00000508514 ABCB5Q2M3G0 1257 aa21.75■■□□□ 1.07
SKP2-204ENST00000508514 LCORLQ8N3X6 602 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms