RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 HSPA4P34932 840 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 TRDNQ13061 729 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 VGLL4Q14135 290 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 KRT32Q14532 448 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 DLK2Q6UY11 383 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
HTT-204ENST00000508321 CABP5Q9NP86 173 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 ZBTB21Q9ULJ3 1066 aa12.14□□□□□ -0.47
HTT-204ENST00000508321 ABT1Q9ULW3 272 aaKnown RBP12.14□□□□□ -0.47
HTT-204ENST00000508321 SPDYE5A6NIY4 337 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 RASSF10A6NK89 507 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 ZBTB48P10074 688 aaPredicted RBP12.13□□□□□ -0.47
HTT-204ENST00000508321 RASA1P20936 1047 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 HAND2P61296 217 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■■□ 25.6
HTT-204ENST00000508321 TSGA10IPQ3SY00 556 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
HTT-204ENST00000508321 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
HTT-204ENST00000508321 SLC44A5Q8NCS7 719 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 ESR2Q92731 530 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 SNCAIPQ9Y6H5 919 aa12.13□□□□□ -0.47
HTT-204ENST00000508321 NEDD4P46934 1319 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 SLC27A2O14975 620 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 INPP5BP32019 993 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 ECE1P42892 770 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 ANAPC15P60006 121 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 HTRA3P83110 453 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 CTDSPL2Q05D32 466 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 PPATQ06203 517 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 PPIL2Q13356 520 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 PRKG1Q13976 671 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
HTT-204ENST00000508321 ERO1BQ86YB8 467 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 KCNB2Q92953 911 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 MTA3Q9BTC8 594 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
HTT-204ENST00000508321 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 SLC10A3P09131 477 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 HMGB1P09429 215 aaKnown RBP12.11□□□□□ -0.47
HTT-204ENST00000508321 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 PTPRAP18433 802 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 EVX2Q03828 476 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 COL13A1Q5TAT6 717 aaPredicted RBP12.11□□□□□ -0.47
HTT-204ENST00000508321 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 ZKSCAN4Q969J2 545 aaPredicted RBP12.11□□□□□ -0.47
HTT-204ENST00000508321 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
HTT-204ENST00000508321 E7EWF7 191 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
HTT-204ENST00000508321 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
HTT-204ENST00000508321 PRDM1O75626 825 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 GDF11O95390 407 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 GH2P01242 217 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 AKR1B1P15121 316 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 ZNF157P51786 506 aaPredicted RBP12.1□□□□□ -0.47
HTT-204ENST00000508321 ICA1Q05084 483 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
HTT-204ENST00000508321 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 RASAL3Q86YV0 1011 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
HTT-204ENST00000508321 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 WNK4Q96J92 1243 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 TCP11L1Q9NUJ3 509 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
HTT-204ENST00000508321 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 PSMA5P28066 241 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 USP14P54578 494 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 TFAP4Q01664 338 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 NOGQ13253 232 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 RRP1BQ14684 758 aaKnown RBP12.09□□□□□ -0.47
HTT-204ENST00000508321 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
HTT-204ENST00000508321 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 OPTNQ96CV9 577 aa12.09□□□□□ -0.47
HTT-204ENST00000508321 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms