RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 THAP5Q7Z6K1 395 aa8.59□□□□□ -1.03
TRAPPC13-209ENST00000508304 MFSD2AQ8NA29 543 aa8.59□□□□□ -1.03
TRAPPC13-209ENST00000508304 MIPEPQ99797 713 aa8.59□□□□□ -1.03
TRAPPC13-209ENST00000508304 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 NKG7Q16617 165 aa8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 PCNX4Q63HM2 1172 aa8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 RETREG2Q8NC44 543 aa8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 PLPPR2Q96GM1 343 aa8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 WNT10AQ9GZT5 417 aa8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 NSUN3Q9H649 340 aaKnown RBP8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-209ENST00000508304 NFIBO00712 420 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 CELA3AP09093 270 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 LILRA6Q6PI73 481 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 RIN3Q8TB24 985 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 CCDC120Q96HB5 630 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 ALPK1Q96QP1 1244 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 DIRC2Q96SL1 478 aa8.57□□□□□ -1.04
TRAPPC13-209ENST00000508304 GIPC1O14908 333 aa8.56□□□□□ -1.04
TRAPPC13-209ENST00000508304 MAPK1P28482 360 aa8.56□□□□□ -1.04
TRAPPC13-209ENST00000508304 HDXQ7Z353 690 aa8.56□□□□□ -1.04
TRAPPC13-209ENST00000508304 GAL3ST3Q96A11 431 aa8.56□□□□□ -1.04
TRAPPC13-209ENST00000508304 GNEQ9Y223 722 aaKnown RBP8.56□□□□□ -1.04
TRAPPC13-209ENST00000508304 ZNF746Q6NUN9 644 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-209ENST00000508304 LETMD1Q6P1Q0 360 aa8.55□□□□□ -1.04
TRAPPC13-209ENST00000508304 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
TRAPPC13-209ENST00000508304 FMR1Q06787 632 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 PDE4CQ08493 712 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 TTLL10Q6ZVT0 673 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 HID1Q8IV36 788 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 UBE2FQ969M7 185 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 CD320Q9NPF0 282 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 RAPGEFL1Q9UHV5 662 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 SNCAIPQ9Y6H5 919 aa8.54□□□□□ -1.04
TRAPPC13-209ENST00000508304 CBX7O95931 251 aa8.53□□□□□ -1.04
TRAPPC13-209ENST00000508304 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
TRAPPC13-209ENST00000508304 ABHD4Q8TB40 342 aa8.53□□□□□ -1.04
TRAPPC13-209ENST00000508304 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
TRAPPC13-209ENST00000508304 SLAMF8Q9P0V8 285 aa8.53□□□□□ -1.04
TRAPPC13-209ENST00000508304 NPIPB6E9PJ23 425 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 RBAK-RBAKDNI3L0D1 243 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 CST3P01034 146 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 KIR3DL1P43629 444 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 MAPK8P45983 427 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 ETF1P62495 437 aaKnown RBP8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 PRAMEF13Q5VWM6 474 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 TTC6Q86TZ1 520 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 EPB41L4BQ9H329 900 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 KCNK12Q9HB15 430 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 ZSWIM5Q9P217 1185 aa8.52□□□□□ -1.05
TRAPPC13-209ENST00000508304 TMEM253P0C7T8 217 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 RAC2P15153 192 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 CDK8P49336 464 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 TNK2Q07912 1038 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 WIPI1Q5MNZ9 446 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 LCE5AQ5TCM9 118 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 KRTAP4-5Q9BYR2 181 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 C12orf49Q9H741 205 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 DCP1AQ9NPI6 582 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 NCANO14594 1321 aa8.51□□□□□ -1.05
TRAPPC13-209ENST00000508304 DNAJC25-GNG10A0A024R161 153 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 ESR1P03372 595 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 CYP7A1P22680 504 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 KCNA10Q16322 511 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 RALGPS1Q5JS13 557 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 SV2BQ7L1I2 683 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
TRAPPC13-209ENST00000508304 PRRG2O14669 202 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 GLDCP23378 1020 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 GRK4P32298 578 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 ATG14Q6ZNE5 492 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 TMPRSS7Q7RTY8 843 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 XAGE3Q8WTP9 111 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 TMEM59LQ9UK28 342 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
TRAPPC13-209ENST00000508304 HPXP02790 462 aa8.48□□□□□ -1.05
TRAPPC13-209ENST00000508304 ERVFC1P60507 584 aa8.48□□□□□ -1.05
TRAPPC13-209ENST00000508304 PIWIL2Q8TC59 973 aaKnown RBP8.48□□□□□ -1.05
TRAPPC13-209ENST00000508304 ETV2O00321 342 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC13-209ENST00000508304 GFRA2O00451 464 aa8.47□□□□□ -1.05
TRAPPC13-209ENST00000508304 TTBK2Q6IQ55 1244 aa8.47□□□□□ -1.05
TRAPPC13-209ENST00000508304 CDH24Q86UP0 819 aa8.47□□□□□ -1.05
TRAPPC13-209ENST00000508304 MYLIPQ8WY64 445 aa8.47□□□□□ -1.05
TRAPPC13-209ENST00000508304 TACC3Q9Y6A5 838 aa8.47□□□□□ -1.05
TRAPPC13-209ENST00000508304 TCAF2A6NFQ2 919 aa8.46□□□□□ -1.06
TRAPPC13-209ENST00000508304 B8ZZF3 427 aa8.46□□□□□ -1.06
TRAPPC13-209ENST00000508304 SLC26A8Q96RN1 970 aa8.46□□□□□ -1.06
TRAPPC13-209ENST00000508304 SMG5Q9UPR3 1016 aaKnown RBP8.46□□□□□ -1.06
TRAPPC13-209ENST00000508304 SRFP11831 508 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 HK2P52789 917 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 CIAPIN1Q6FI81 312 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 ZSCAN29Q8IWY8 852 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC13-209ENST00000508304 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms