RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 IFNL3Q8IZI9 196 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 PANX2Q96RD6 677 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 MYH8P13535 1937 aa15.31■□□□□ 0.04
SNCAIP-209ENST00000508017 PCDH11XQ9BZA7 1347 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 PCDH11YQ9BZA8 1340 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 VGLL3A8MV65 326 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 RILPL1Q5EBL4 403 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 SMYD4Q8IYR2 804 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 PNKPQ96T60 521 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 NAPBQ9H115 298 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 SRPRBQ9Y5M8 271 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-209ENST00000508017 CCDC151A5D8V7 595 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 MBD4O95243 580 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 AFMP43652 599 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 RTN1Q16799 776 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 SPATA20Q8TB22 786 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 MAP2K7O14733 419 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 PRKAB2O43741 272 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 COBLO75128 1261 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 ABL1P00519 1130 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 HELBQ8NG08 1087 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 WASF1Q92558 559 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 SHISA4Q96DD7 197 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 TOMM22Q9NS69 142 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 ADAM21Q9UKJ8 722 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
SNCAIP-209ENST00000508017 MYH6P13533 1939 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 HLFQ16534 295 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 PPFIBP1Q86W92 1011 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 TRIM22Q8IYM9 498 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 MAGEB6Q8N7X4 407 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 EPSTI1Q96J88 318 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 SUGCTQ9HAC7 445 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 SYNRGQ9UMZ2 1314 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 PBX1P40424 430 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 LMAN1P49257 510 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 GPS2Q13227 327 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 MCM6Q14566 821 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 BRD3Q15059 726 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 ALX1Q15699 326 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 ZSCAN26Q16670 478 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 AKNAD1Q5T1N1 836 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 KIF6Q6ZMV9 814 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 ADD3Q9UEY8 706 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
SNCAIP-209ENST00000508017 TNS2Q63HR2 1409 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 SNAP23O00161 211 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 KIF5CO60282 957 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 MFAP3LO75121 409 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 PDE8BO95263 885 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 CASP14P31944 242 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 CUL4BQ13620 913 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 BEND6Q5SZJ8 279 aaPredicted RBP15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 SPATA1Q5VX52 437 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 ACRBPQ8NEB7 543 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 FEZ2Q9UHY8 353 aaPredicted RBP15.27■□□□□ 0.04
SNCAIP-209ENST00000508017 ANKRD18BA2A2Z9 1011 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 ARID4AP29374 1257 aaPredicted RBP15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 CTSWP56202 376 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 EARS2Q5JPH6 523 aaKnown RBP15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 WWC2Q6AWC2 1192 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 TOM1L2Q6ZVM7 507 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 DNAJC10Q8IXB1 793 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 SLC35F6Q8N357 371 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 NUP133Q8WUM0 1156 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.03
SNCAIP-209ENST00000508017 NID2Q14112 1375 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 MYH3P11055 1940 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 WNT7AO00755 349 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 DEXIO95424 95 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 GYPCP04921 128 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 DPYDQ12882 1025 aa15.26■□□□□ 0.03
SNCAIP-209ENST00000508017 WTAPQ15007 396 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms