RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 LIG3P49916 1009 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 CASP7P55210 303 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 RWDD2BP57060 319 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 FOXO4P98177 505 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 EZH2Q15910 746 aaKnown RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 CCDC57Q2TAC2 916 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 KIF4BQ2VIQ3 1234 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 SLC27A3Q5K4L6 730 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 RCSD1Q6JBY9 416 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 ZNF34Q8IZ26 560 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 CCDC26Q8TAB7 109 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 RHPN1Q8TCX5 695 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 SPOCK2Q92563 424 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 SETDB2Q96T68 719 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 EPC1Q9H2F5 836 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 GOLGA6L4A6NEF3 574 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 ARHGAP6O43182 974 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 NEBLO76041 1014 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 SYF2O95926 243 aaKnown RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 PAX7P23759 505 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 SLC5A9Q2M3M2 681 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 AP1ARQ63HQ0 302 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 CDC37L1Q7L3B6 337 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 DEFB132Q7Z7B7 95 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 ARMC2Q8NEN0 867 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 ERCC4Q92889 916 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-204ENST00000507996 HOMER3Q9NSC5 361 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 NARFQ9UHQ1 456 aa6.97□□□□□ -1.29
KDM3B-204ENST00000507996 SH3TC1Q8TE82 1336 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 ZEB2O60315 1214 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 CHMP4BP1P59074 171 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 CDCA2Q69YH5 1023 aaPredicted RBP6.96□□□□□ -1.29
KDM3B-204ENST00000507996 ATL3Q6DD88 541 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 TMC6Q7Z403 805 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 IQCA1Q86XH1 822 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 ENGASEQ8NFI3 743 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 CLIC6Q96NY7 704 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 XPO4Q9C0E2 1151 aaKnown RBP6.96□□□□□ -1.29
KDM3B-204ENST00000507996 CCDC8Q9H0W5 538 aaPredicted RBP6.96□□□□□ -1.29
KDM3B-204ENST00000507996 PPP2R2CQ9Y2T4 447 aa6.96□□□□□ -1.29
KDM3B-204ENST00000507996 NUP188Q5SRE5 1749 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 A0A1B0GUA9 196 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 IKBKBO14920 756 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 RNF40O75150 1001 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 MAP4K4O95819 1239 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-204ENST00000507996 RDXP35241 583 aaKnown RBP6.96□□□□□ -1.3
KDM3B-204ENST00000507996 SMTNP53814 917 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 IFIT5Q13325 482 aaKnown RBP6.96□□□□□ -1.3
KDM3B-204ENST00000507996 DRP2Q13474 957 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 MTX1Q13505 466 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 HSP90AB4PQ58FF6 505 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 CCDC50Q8IVM0 306 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 CCDC83Q8IWF9 413 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 CLASRPQ8N2M8 674 aaKnown RBP6.96□□□□□ -1.3
KDM3B-204ENST00000507996 GREM2Q9H772 168 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 ATP6V0A4Q9HBG4 840 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 ODF2LQ9ULJ1 636 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 NUP98P52948 1817 aa6.96□□□□□ -1.3
KDM3B-204ENST00000507996 VPS37CA5D8V6 355 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 MPHOSPH10O00566 681 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PLSCR1O15162 318 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RAB11FIP3O75154 756 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RASSF9O75901 435 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 IFIT2P09913 472 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PTPN12Q05209 780 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 RESTQ13127 1097 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PDCD2Q16342 344 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 ZNF827Q17R98 1081 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 ERFEQ4G0M1 354 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PARP10Q53GL7 1025 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 LARP1BQ659C4 914 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 B4GALNT4Q76KP1 1039 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 AACSQ86V21 672 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 AOPEPQ8N6M6 819 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 TCP11Q8WWU5 503 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 WDR24Q96S15 920 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PNKPQ96T60 521 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 BATF3Q9NR55 127 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 SPATS2LQ9NUQ6 558 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 GRIN2DO15399 1336 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 ANKRD65E5RJM6 399 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PDE8AO60658 829 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 ITGA6P23229 1130 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PRPHP41219 470 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 ARHGAP25P42331 645 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 LRRC24Q50LG9 513 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CLEC4GQ6UXB4 293 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 CCAR1Q8IX12 1150 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 NEUROD6Q96NK8 337 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 PUS3Q9BZE2 481 aaKnown RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 IL25Q9H293 177 aa6.95□□□□□ -1.3
KDM3B-204ENST00000507996 COL5A3P25940 1745 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-204ENST00000507996 EIF3HO15372 352 aaKnown RBP eCLIP6.95□□□□□ -1.34e-7■■■□□ 15.7
KDM3B-204ENST00000507996 SASH1O94885 1247 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms