RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 POLD1P28340 1107 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 CRKP46108 304 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 TROAPQ12815 778 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 FAM47AQ5JRC9 791 aa19.31■□□□□ 0.68
DDX41-207ENST00000507900 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
DDX41-207ENST00000507900 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
DDX41-207ENST00000507900 ISY1Q9ULR0 285 aaKnown RBP19.31■□□□□ 0.68
DDX41-207ENST00000507900 FER1L6Q2WGJ9 1857 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
DDX41-207ENST00000507900 ZBTB7AO95365 584 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 RASA1P20936 1047 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 SCNN1DP51172 638 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
DDX41-207ENST00000507900 RCSD1Q6JBY9 416 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 DGKHQ86XP1 1220 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 ALG1Q9BT22 464 aa19.3■□□□□ 0.68
DDX41-207ENST00000507900 RBM28Q9NW13 759 aaKnown RBP19.3■□□□□ 0.68
DDX41-207ENST00000507900 TFAP4Q01664 338 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 CDC42EP5Q6NZY7 148 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 TTC6Q86TZ1 520 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 WASF1Q92558 559 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 PHKBQ93100 1093 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 MKNK2Q9HBH9 465 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 SERPINA10Q9UK55 444 aa19.29■□□□□ 0.68
DDX41-207ENST00000507900 FSD2A1L4K1 749 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 YDJCA8MPS7 323 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 CDK8P49336 464 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 FOSBP53539 338 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 SLC4A8Q2Y0W8 1093 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 CAVIN1Q6NZI2 390 aaKnown RBP19.28■□□□□ 0.68
DDX41-207ENST00000507900 TRIM22Q8IYM9 498 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 CRACR2BQ8N4Y2 399 aaPredicted RBP19.28■□□□□ 0.68
DDX41-207ENST00000507900 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 CFAP45Q9UL16 551 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 COL4A5P29400 1685 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 PLIN4Q96Q06 1357 aa19.28■□□□□ 0.68
DDX41-207ENST00000507900 NMT2O60551 498 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 ZNF445P59923 1031 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 GUCY1B3Q02153 619 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 BRAPQ7Z569 592 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 KIAA0825Q8IV33 1275 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 ZNF444Q8N0Y2 327 aaPredicted RBP19.27■□□□□ 0.68
DDX41-207ENST00000507900 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 MAP3K14Q99558 947 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 SLC26A6Q9BXS9 759 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 RNF26Q9BY78 433 aaPredicted RBP19.27■□□□□ 0.68
DDX41-207ENST00000507900 DDX4Q9NQI0 724 aaKnown RBP19.27■□□□□ 0.68
DDX41-207ENST00000507900 PIM2Q9P1W9 311 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 MYO3BQ8WXR4 1341 aa19.27■□□□□ 0.68
DDX41-207ENST00000507900 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.67
DDX41-207ENST00000507900 DEXIO95424 95 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 TSPY3P0CV98 308 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 TSPY8P0CW00 308 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 GABPAQ06546 454 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 FUT2Q10981 343 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.67
DDX41-207ENST00000507900 SGIP1Q9BQI5 828 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 OSBPL5Q9H0X9 879 aaPredicted RBP19.27■□□□□ 0.67
DDX41-207ENST00000507900 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.67
DDX41-207ENST00000507900 SIPA1L1O43166 1804 aa19.26■□□□□ 0.67
DDX41-207ENST00000507900 GREB1LQ9C091 1923 aaPredicted RBP19.26■□□□□ 0.67
DDX41-207ENST00000507900 KIF23Q02241 960 aaPredicted RBP19.26■□□□□ 0.67
DDX41-207ENST00000507900 ZSCAN23Q3MJ62 389 aa19.26■□□□□ 0.67
DDX41-207ENST00000507900 NEDD1Q8NHV4 660 aa19.26■□□□□ 0.67
DDX41-207ENST00000507900 SYAP1Q96A49 352 aaPredicted RBP19.26■□□□□ 0.67
DDX41-207ENST00000507900 SPATA32Q96LK8 384 aa19.26■□□□□ 0.67
DDX41-207ENST00000507900 ZNF396Q96N95 335 aaPredicted RBP19.26■□□□□ 0.67
DDX41-207ENST00000507900 AIFM3Q96NN9 605 aa19.26■□□□□ 0.67
DDX41-207ENST00000507900 TAOK2Q9UL54 1235 aa19.26■□□□□ 0.67
DDX41-207ENST00000507900 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
DDX41-207ENST00000507900 NOVP48745 357 aa19.25■□□□□ 0.67
DDX41-207ENST00000507900 KRT40Q6A162 431 aa19.25■□□□□ 0.67
DDX41-207ENST00000507900 OTUD7BQ6GQQ9 843 aa19.25■□□□□ 0.67
DDX41-207ENST00000507900 TMTC3Q6ZXV5 915 aa19.25■□□□□ 0.67
DDX41-207ENST00000507900 IDI2Q9BXS1 227 aa19.25■□□□□ 0.67
DDX41-207ENST00000507900 PICALMQ13492 652 aa19.24■□□□□ 0.67
DDX41-207ENST00000507900 KAT14Q9H8E8 782 aa19.24■□□□□ 0.67
DDX41-207ENST00000507900 TFIP11Q9UBB9 837 aaKnown RBP19.24■□□□□ 0.67
DDX41-207ENST00000507900 SWAP70Q9UH65 585 aa19.24■□□□□ 0.67
DDX41-207ENST00000507900 COL2A1P02458 1487 aaPredicted RBP19.24■□□□□ 0.67
DDX41-207ENST00000507900 PRPF3O43395 683 aaKnown RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 TRIM29Q14134 588 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 R3HDM1Q15032 1099 aaKnown RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 EHD4Q9H223 541 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 GJB4Q9NTQ9 266 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 RBM27Q9P2N5 1060 aaKnown RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 RCOR1Q9UKL0 485 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 GOLGA6L3A6NEY3 463 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 VIL1P09327 827 aaKnown RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 RSBN1LQ6PCB5 846 aaPredicted RBP19.23■□□□□ 0.67
DDX41-207ENST00000507900 KLHL34Q8N239 644 aa19.23■□□□□ 0.67
DDX41-207ENST00000507900 UPF1Q92900 1129 aaKnown RBP eCLIP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms