RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 PCDHB10Q9UN67 800 aa4.47□□□□□ -1.69
CCDC30-212ENST00000507855 SAMM50Q9Y512 469 aa4.47□□□□□ -1.69
CCDC30-212ENST00000507855 SLC22A31A6NKX4 558 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 MAFGO15525 162 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 BPNT1O95861 308 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 PROCP04070 461 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 PTMAP06454 111 aaKnown RBP4.46□□□□□ -1.69
CCDC30-212ENST00000507855 ERVK-24P63145 666 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 CWF19L2Q2TBE0 894 aaKnown RBP4.46□□□□□ -1.69
CCDC30-212ENST00000507855 PRAMEF13Q5VWM6 474 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 OVOS1Q6IE37 1185 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 DDX54Q8TDD1 881 aaKnown RBP4.46□□□□□ -1.69
CCDC30-212ENST00000507855 PSMG3-AS1Q96PY0 264 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 GMLQ99445 158 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 LGR4Q9BXB1 951 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 WNT10AQ9GZT5 417 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 C1GALT1Q9NS00 363 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 STK17AQ9UEE5 414 aa4.46□□□□□ -1.69
CCDC30-212ENST00000507855 SPDYE3A6NKU9 549 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 B2RBV5 119 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 PPM1GO15355 546 aaPredicted RBP4.46□□□□□ -1.7
CCDC30-212ENST00000507855 GDF11O95390 407 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 SETQ01105 290 aaPredicted RBP4.46□□□□□ -1.7
CCDC30-212ENST00000507855 ARID5AQ03989 594 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 SEZ6L2Q6UXD5 910 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 LSRQ86X29 649 aaPredicted RBP4.46□□□□□ -1.7
CCDC30-212ENST00000507855 SMYD4Q8IYR2 804 aaPredicted RBP4.46□□□□□ -1.7
CCDC30-212ENST00000507855 HNRNPLLQ8WVV9 542 aaKnown RBP4.46□□□□□ -1.7
CCDC30-212ENST00000507855 C8orf37Q96NL8 207 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 SLC9A7Q96T83 725 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 CYP4F12Q9HCS2 524 aa4.46□□□□□ -1.7
CCDC30-212ENST00000507855 RRP9O43818 475 aaKnown RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 SLFN14P0C7P3 912 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 FAM50AQ14320 339 aaKnown RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 ARSHQ5FYA8 562 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 HDXQ7Z353 690 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 FAM9BQ8IZU0 186 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 TMTC2Q8N394 836 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 RNF214Q8ND24 703 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 UTP4Q969X6 686 aaKnown RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 TP53INP1Q96A56 240 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 ZNF512BQ96KM6 892 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 MYRFLQ96LU7 910 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 ZNRF3Q9ULT6 936 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 PRR36Q9H6K5 1346 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 LTBP3Q9NS15 1303 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 C9orf172C9J069 976 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 CLGNO14967 610 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 APBA3O96018 575 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 ITGB7P26010 798 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 MAP4P27816 1152 aaKnown RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 CALD1Q05682 793 aaKnown RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 KCNMA1Q12791 1236 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 HSP90AA2PQ14568 343 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 CCDC84Q86UT8 332 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 BAHD1Q8TBE0 780 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-212ENST00000507855 GATA6Q92908 595 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 ATG4CQ96DT6 458 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 FERD3LQ96RJ6 166 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 KCNF1Q9H3M0 494 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 EHMT1Q9H9B1 1298 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 HDAC5Q9UQL6 1122 aa4.45□□□□□ -1.7
CCDC30-212ENST00000507855 VGLL3A8MV65 326 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 SMAD7O15105 426 aaKnown RBP4.44□□□□□ -1.7
CCDC30-212ENST00000507855 SLITRK5O94991 958 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 FAM20CQ8IXL6 584 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 ST7Q9NRC1 585 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 PICK1Q9NRD5 415 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 COL17A1Q9UMD9 1497 aaPredicted RBP4.44□□□□□ -1.7
CCDC30-212ENST00000507855 PLEKHD1A6NEE1 506 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 FAM170BA6NMN3 283 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 PRR33A8MZF0 331 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 LRRN2O75325 713 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 UBOX5O94941 541 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 ANKRD34AQ69YU3 496 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 GPAT2Q6NUI2 795 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 ARMCX6Q7L4S7 300 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 FBXL6Q8N531 539 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 PPP1R13LQ8WUF5 828 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 KIF2CQ99661 725 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 SPOCK3Q9BQ16 436 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 SRRTQ9BXP5 876 aaKnown RBP4.44□□□□□ -1.7
CCDC30-212ENST00000507855 MINPP1Q9UNW1 487 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 SH3BP1Q9Y3L3 701 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 SNCAIPQ9Y6H5 919 aa4.44□□□□□ -1.7
CCDC30-212ENST00000507855 WASH4PA8MWX3 477 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 SART1O43290 800 aaKnown RBP4.43□□□□□ -1.7
CCDC30-212ENST00000507855 RXRBP28702 533 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 GIPRP48546 466 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 USP11P51784 963 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 NFKBIBQ15653 356 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 BEND4Q6ZU67 534 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.43□□□□□ -1.7
CCDC30-212ENST00000507855 TMEM192Q8IY95 271 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 SLC43A3Q8NBI5 491 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 PMFBP1Q8TBY8 1022 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 SREK1Q8WXA9 508 aaKnown RBP4.43□□□□□ -1.7
CCDC30-212ENST00000507855 TMEM87BQ96K49 555 aa4.43□□□□□ -1.7
CCDC30-212ENST00000507855 CCDC85CA6NKD9 419 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms