RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 IRF5Q13568 498 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 CERS3Q8IU89 383 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
SSBP2-207ENST00000507472 PXYLP1Q8TE99 480 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 UNC93B1Q9H1C4 597 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 GINM1Q9NU53 330 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 TMOD4Q9NZQ9 345 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 ZBTB21Q9ULJ3 1066 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 DDX19BQ9UMR2 479 aa19.3■□□□□ 0.68
SSBP2-207ENST00000507472 DOCK3Q8IZD9 2030 aa19.29■□□□□ 0.68
SSBP2-207ENST00000507472 C19orf81C9J6K1 198 aa19.29■□□□□ 0.68
SSBP2-207ENST00000507472 USP17L10C9JJH3 530 aa19.29■□□□□ 0.68
SSBP2-207ENST00000507472 TMED8Q6PL24 325 aaPredicted RBP19.29■□□□□ 0.68
SSBP2-207ENST00000507472 CLASRPQ8N2M8 674 aaKnown RBP19.29■□□□□ 0.68
SSBP2-207ENST00000507472 KIF1BPQ96EK5 621 aa19.29■□□□□ 0.68
SSBP2-207ENST00000507472 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
SSBP2-207ENST00000507472 TAOK2Q9UL54 1235 aa19.29■□□□□ 0.68
SSBP2-207ENST00000507472 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
SSBP2-207ENST00000507472 HMMRO75330 724 aa19.28■□□□□ 0.68
SSBP2-207ENST00000507472 INHAP05111 366 aa19.28■□□□□ 0.68
SSBP2-207ENST00000507472 HOXA7P31268 230 aaPredicted RBP19.28■□□□□ 0.68
SSBP2-207ENST00000507472 IRX3P78415 501 aaPredicted RBP19.28■□□□□ 0.68
SSBP2-207ENST00000507472 P2RX7Q99572 595 aaKnown RBP19.28■□□□□ 0.68
SSBP2-207ENST00000507472 MAST2Q6P0Q8 1798 aa19.28■□□□□ 0.68
SSBP2-207ENST00000507472 MGAMO43451 1857 aa19.28■□□□□ 0.68
SSBP2-207ENST00000507472 GH2P01242 217 aa19.27■□□□□ 0.68
SSBP2-207ENST00000507472 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.68
SSBP2-207ENST00000507472 HABP4Q5JVS0 413 aaKnown RBP19.27■□□□□ 0.68
SSBP2-207ENST00000507472 TATDN1Q6P1N9 297 aa19.27■□□□□ 0.68
SSBP2-207ENST00000507472 U2AF1L4Q8WU68 220 aaKnown RBP19.27■□□□□ 0.68
SSBP2-207ENST00000507472 RIOK1Q9BRS2 568 aaKnown RBP19.27■□□□□ 0.68
SSBP2-207ENST00000507472 SERPINB13Q9UIV8 391 aa19.27■□□□□ 0.68
SSBP2-207ENST00000507472 RCAN3Q9UKA8 241 aa19.27■□□□□ 0.68
SSBP2-207ENST00000507472 ATAD5Q96QE3 1844 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 PEX10O60683 326 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 SGPL1O95470 568 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 IFIT2P09913 472 aaKnown RBP19.26■□□□□ 0.67
SSBP2-207ENST00000507472 SLC9C2Q5TAH2 1124 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 UBE2Q1Q7Z7E8 422 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 TTC6Q86TZ1 520 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 EHD4Q9H223 541 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 EMILIN3Q9NT22 766 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 MORF4L1Q9UBU8 362 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 GJD2Q9UKL4 321 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 CDK5RAP2Q96SN8 1893 aa19.26■□□□□ 0.67
SSBP2-207ENST00000507472 MAGEB6P1A0A0J9YX57 407 aa19.25■□□□□ 0.67
SSBP2-207ENST00000507472 H0YGN5 161 aa19.25■□□□□ 0.67
SSBP2-207ENST00000507472 PDE6AP16499 860 aa19.25■□□□□ 0.67
SSBP2-207ENST00000507472 PLCD1P51178 756 aa19.25■□□□□ 0.67
SSBP2-207ENST00000507472 DPF3Q92784 378 aa19.25■□□□□ 0.67
SSBP2-207ENST00000507472 LOC285556D6RIA3 1793 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 GOLIM4O00461 696 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 RAB11FIP3O75154 756 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 HERVK_113P62684 666 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 USP17L2Q6R6M4 530 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 GPRC5AQ8NFJ5 357 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.24■□□□□ 0.67
SSBP2-207ENST00000507472 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 DNAJC2Q99543 621 aaKnown RBP19.24■□□□□ 0.67
SSBP2-207ENST00000507472 TXNRD2Q9NNW7 524 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 TRIOBPQ9H2D6 2365 aa19.24■□□□□ 0.67
SSBP2-207ENST00000507472 FOCADQ5VW36 1801 aa19.23■□□□□ 0.67
SSBP2-207ENST00000507472 TFRCP02786 760 aaKnown RBP19.23■□□□□ 0.67
SSBP2-207ENST00000507472 CERKLQ49MI3 558 aaPredicted RBP19.23■□□□□ 0.67
SSBP2-207ENST00000507472 EDC3Q96F86 508 aaKnown RBP19.23■□□□□ 0.67
SSBP2-207ENST00000507472 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
SSBP2-207ENST00000507472 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
SSBP2-207ENST00000507472 COLQQ9Y215 455 aaPredicted RBP19.23■□□□□ 0.67
SSBP2-207ENST00000507472 ZNF532Q9HCE3 1301 aa19.23■□□□□ 0.67
SSBP2-207ENST00000507472 TCRBV5S4A2TA0A5A2 114 aa19.22■□□□□ 0.67
SSBP2-207ENST00000507472 FARP2O94887 1054 aaPredicted RBP19.22■□□□□ 0.67
SSBP2-207ENST00000507472 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
SSBP2-207ENST00000507472 RAB3GAP1Q15042 981 aa19.22■□□□□ 0.67
SSBP2-207ENST00000507472 ZYXQ15942 572 aaKnown RBP19.22■□□□□ 0.67
SSBP2-207ENST00000507472 ABCB5Q2M3G0 1257 aa19.22■□□□□ 0.67
SSBP2-207ENST00000507472 Q3C1V9 767 aa19.22■□□□□ 0.67
SSBP2-207ENST00000507472 POTEEQ6S8J3 1075 aa19.22■□□□□ 0.67
SSBP2-207ENST00000507472 CRNKL1Q9BZJ0 848 aaKnown RBP19.22■□□□□ 0.67
SSBP2-207ENST00000507472 PAK6Q9NQU5 681 aaPredicted RBP19.22■□□□□ 0.67
SSBP2-207ENST00000507472 SHMT1P34896 483 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 C20orf194Q5TEA3 1177 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 FEZ1Q99689 392 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 HTATIP2Q9BUP3 242 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 BOLA2Q9H3K6 86 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 MCM9Q9NXL9 1143 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 PCDH10Q9P2E7 1040 aa19.21■□□□□ 0.67
SSBP2-207ENST00000507472 RANBP2P49792 3224 aaKnown RBP19.2■□□□□ 0.66
SSBP2-207ENST00000507472 MYH1P12882 1939 aa19.2■□□□□ 0.66
SSBP2-207ENST00000507472 HMGCRP04035 888 aa19.2■□□□□ 0.66
SSBP2-207ENST00000507472 EVX2Q03828 476 aa19.2■□□□□ 0.66
SSBP2-207ENST00000507472 SLFNL1Q499Z3 407 aa19.2■□□□□ 0.66
SSBP2-207ENST00000507472 KIAA1683Q9H0B3 1180 aa19.2■□□□□ 0.66
SSBP2-207ENST00000507472 CABP5Q9NP86 173 aa19.2■□□□□ 0.66
SSBP2-207ENST00000507472 ATP5JP18859 108 aa19.19■□□□□ 0.66
SSBP2-207ENST00000507472 CYP2B6P20813 491 aa19.19■□□□□ 0.66
SSBP2-207ENST00000507472 GUCY1A2P33402 732 aa19.19■□□□□ 0.66
SSBP2-207ENST00000507472 ERVK-9P63128 1117 aa19.19■□□□□ 0.66
SSBP2-207ENST00000507472 ERVK-24P63145 666 aa19.19■□□□□ 0.66
SSBP2-207ENST00000507472 GABPAQ06546 454 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms