RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM6-209ENST00000507320 ZKSCAN4Q969J2 545 aaPredicted RBP12.63□□□□□ -0.39
TRIM6-209ENST00000507320 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
TRIM6-209ENST00000507320 ZNF112Q9UJU3 913 aa12.63□□□□□ -0.39
TRIM6-209ENST00000507320 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-209ENST00000507320 RANBP6O60518 1105 aaKnown RBP12.62□□□□□ -0.39
TRIM6-209ENST00000507320 MCCP23508 829 aa12.62□□□□□ -0.39
TRIM6-209ENST00000507320 TTLL12Q14166 644 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-209ENST00000507320 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-209ENST00000507320 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-209ENST00000507320 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-209ENST00000507320 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 KDM4AO75164 1064 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CPA1P15085 419 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CAP2P40123 477 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 FSTL1Q12841 308 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 MAP3K11Q16584 847 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 POTEHQ6S545 545 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CHST3Q7LGC8 479 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 KIF2CQ99661 725 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 NMT2O60551 498 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 GH2P01242 217 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 PCP11498 1178 aaKnown RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 TFAP4Q01664 338 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 VGLL4Q14135 290 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CCDC84Q86UT8 332 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CLEC10AQ8IUN9 316 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
TRIM6-209ENST00000507320 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 ZSWIM5Q9P217 1185 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
TRIM6-209ENST00000507320 TSPY2A6NKD2 308 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
TRIM6-209ENST00000507320 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
TRIM6-209ENST00000507320 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ANTXR2P58335 489 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ANAPC15P60006 121 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 TRDNQ13061 729 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ABCB5Q2M3G0 1257 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ARMC9Q7Z3E5 817 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ESR2Q92731 530 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 TCEANC2Q96MN5 208 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ZKSCAN3Q9BRR0 538 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 UPF3BQ9BZI7 483 aaKnown RBP12.6□□□□□ -0.39
TRIM6-209ENST00000507320 KRT23Q9C075 422 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 CNNM2Q9H8M5 875 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 IL17RBQ9NRM6 502 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
TRIM6-209ENST00000507320 ZBTB21Q9ULJ3 1066 aa12.6□□□□□ -0.39
TRIM6-209ENST00000507320 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 KRT32Q14532 448 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 SEPT2Q15019 361 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 LDLRAD1Q5T700 205 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
TRIM6-209ENST00000507320 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.39
TRIM6-209ENST00000507320 FKBP1BP68106 108 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 ANKRD13AQ8IZ07 590 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 C2orf69Q8N8R5 385 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 LRRC2Q9BYS8 371 aa12.58□□□□□ -0.39
TRIM6-209ENST00000507320 PLIN4Q96Q06 1357 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 PHIPQ8WWQ0 1821 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 ASNSP08243 561 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 NOL9Q5SY16 702 aaKnown RBP12.58□□□□□ -0.4
TRIM6-209ENST00000507320 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 SAPCD2Q86UD0 394 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 CEP95Q96GE4 821 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 ELP3Q9H9T3 547 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
TRIM6-209ENST00000507320 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
TRIM6-209ENST00000507320 PRC1O43663 620 aa12.57□□□□□ -0.4
TRIM6-209ENST00000507320 PTPRAP18433 802 aa12.57□□□□□ -0.4
TRIM6-209ENST00000507320 MCM5P33992 734 aa12.57□□□□□ -0.4
TRIM6-209ENST00000507320 HUNKP57058 714 aa12.57□□□□□ -0.4
TRIM6-209ENST00000507320 EXOSC10Q01780 885 aaKnown RBP12.57□□□□□ -0.4
TRIM6-209ENST00000507320 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms