RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
CALCOCO2-208ENST00000506971 PRR33A8MZF0 331 aa6.88□□□□□ -1.31
CALCOCO2-208ENST00000506971 H3BS24 57 aa6.88□□□□□ -1.31
CALCOCO2-208ENST00000506971 BIN1O00499 593 aa6.88□□□□□ -1.31
CALCOCO2-208ENST00000506971 PLCG1P19174 1290 aa6.88□□□□□ -1.31
CALCOCO2-208ENST00000506971 BCL11AQ9H165 835 aa6.88□□□□□ -1.31
CALCOCO2-208ENST00000506971 IGF2BP3O00425 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 CTSHP09668 335 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 FUT4P22083 530 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 CYP7A1P22680 504 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 CHMP4BP1P59074 171 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 SNAP47Q5SQN1 464 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 BNC2Q6ZN30 1099 aaPredicted RBP6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 FBXO33Q7Z6M2 555 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 SPACA3Q8IXA5 215 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 MFSD4AQ8N468 514 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 CRELD1Q96HD1 420 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 HSPA12BQ96MM6 686 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
CALCOCO2-208ENST00000506971 RBAK-RBAKDNI3L0D1 243 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 CST3P01034 146 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 PF4P02776 101 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 ITGAEP38570 1179 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 TNNI2P48788 182 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 ST13P50502 369 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 RPL6Q02878 288 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 NKPD1Q17RQ9 610 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 ZNF326Q5BKZ1 582 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 ZNF746Q6NUN9 644 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 FAM214BQ7L5A3 538 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 TMEM87BQ96K49 555 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 NOC4LQ9BVI4 516 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 MBNL3Q9NUK0 354 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 ZSWIM5Q9P217 1185 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 ADAMTS6Q9UKP5 1117 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 MAPK8IP1Q9UQF2 711 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 CORINQ9Y5Q5 1042 aa6.86□□□□□ -1.31
CALCOCO2-208ENST00000506971 CNTNAP4Q9C0A0 1308 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 GFRA2O00451 464 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 JUNBP17275 347 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 CAMK2GQ13555 558 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 CBLL1Q75N03 491 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 LRRN4CLQ8ND94 238 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 FAM13CQ8NE31 585 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 CARS2Q9HA77 564 aaKnown RBP6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 ATP13A1Q9HD20 1204 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 KLHL3Q9UH77 587 aa6.85□□□□□ -1.31
CALCOCO2-208ENST00000506971 USP31Q70CQ4 1352 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 UPK3BL1B0FP48 263 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 UPK3BL2E5RIL1 263 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 TLR3O15455 904 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 F13A1P00488 732 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 ERCC3P19447 782 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 CLCN7P51798 805 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 GOLM1Q8NBJ4 401 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 UBE2FQ969M7 185 aa6.84□□□□□ -1.31
CALCOCO2-208ENST00000506971 SLC6A19Q695T7 634 aa6.83□□□□□ -1.32
CALCOCO2-208ENST00000506971 SLC23A3Q6PIS1 610 aa6.83□□□□□ -1.32
CALCOCO2-208ENST00000506971 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
CALCOCO2-208ENST00000506971 FAM168AQ92567 244 aa6.83□□□□□ -1.32
CALCOCO2-208ENST00000506971 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
CALCOCO2-208ENST00000506971 TNKS2Q9H2K2 1166 aa6.83□□□□□ -1.32
CALCOCO2-208ENST00000506971 ZCCHC6Q5VYS8 1495 aaKnown RBP6.82□□□□□ -1.32
CALCOCO2-208ENST00000506971 ETV3P41162 512 aa6.82□□□□□ -1.32
CALCOCO2-208ENST00000506971 YARSP54577 528 aaKnown RBP6.82□□□□□ -1.32
CALCOCO2-208ENST00000506971 PWP1Q13610 501 aa6.82□□□□□ -1.32
CALCOCO2-208ENST00000506971 ACSF2Q96CM8 615 aaPredicted RBP6.82□□□□□ -1.32
CALCOCO2-208ENST00000506971 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
CALCOCO2-208ENST00000506971 PITPNM2Q9BZ72 1349 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 PAPLNO95428 1278 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 LMNB2Q03252 620 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 TMCO4Q5TGY1 634 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 MCATQ8IVS2 390 aaKnown RBP6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 MRPL41Q8IXM3 137 aaKnown RBP6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 PHACTR4Q8IZ21 702 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 GATAD2BQ8WXI9 593 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 GOLGA2P5Q9HBQ8 144 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 KBTBD4Q9NVX7 518 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 CAPN6Q9Y6Q1 641 aa6.81□□□□□ -1.32
CALCOCO2-208ENST00000506971 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 ITGB5P18084 799 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 CAP2P40123 477 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 OGFOD2Q6N063 350 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 ATG4DQ86TL0 474 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 FMNL2Q96PY5 1086 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 SLAMF8Q9P0V8 285 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 GGT7Q9UJ14 662 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 TACC3Q9Y6A5 838 aa6.8□□□□□ -1.32
CALCOCO2-208ENST00000506971 CILPO75339 1184 aa6.79□□□□□ -1.32
CALCOCO2-208ENST00000506971 TNK2Q07912 1038 aa6.79□□□□□ -1.32
CALCOCO2-208ENST00000506971 KCNMB1Q16558 191 aa6.79□□□□□ -1.32
CALCOCO2-208ENST00000506971 CREG2Q8IUH2 290 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms