RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 CELA3AP09093 270 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 USP17L7P0C7H9 530 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 NTF4P34130 210 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 ERVK-24P63145 666 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 IKZF1Q13422 519 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 RNF214Q8ND24 703 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 ANKRD24Q8TF21 1146 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 ACSBG1Q96GR2 724 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 EPB41L4BQ9H329 900 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 DCP1AQ9NPI6 582 aaPredicted RBP6.49□□□□□ -1.37
SSBP2-206ENST00000506960 SPG7Q9UQ90 795 aa6.49□□□□□ -1.37
SSBP2-206ENST00000506960 LDHBP07195 334 aaKnown RBP6.48□□□□□ -1.37
SSBP2-206ENST00000506960 BMP7P18075 431 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 LLGL2Q6P1M3 1020 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 SLC26A8Q96RN1 970 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 DUSP23Q9BVJ7 150 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 PRDM7Q9NQW5 492 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 FAM8A1Q9UBU6 413 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 PCOLCE2Q9UKZ9 415 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 CSADQ9Y600 493 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 CNTNAP4Q9C0A0 1308 aa6.48□□□□□ -1.37
SSBP2-206ENST00000506960 SUV39H1O43463 412 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 TRIM37O94972 964 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 OXCT1P55809 520 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
SSBP2-206ENST00000506960 IRF2BPLQ9H1B7 796 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 TNKS2Q9H2K2 1166 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 SAMM50Q9Y512 469 aa6.47□□□□□ -1.37
SSBP2-206ENST00000506960 DCDC2CA8MYV0 355 aa6.46□□□□□ -1.38
SSBP2-206ENST00000506960 ETV2O00321 342 aaPredicted RBP6.46□□□□□ -1.38
SSBP2-206ENST00000506960 PDIA4P13667 645 aaKnown RBP6.46□□□□□ -1.38
SSBP2-206ENST00000506960 RING1Q06587 406 aa6.46□□□□□ -1.38
SSBP2-206ENST00000506960 ZXDCQ2QGD7 858 aaPredicted RBP6.46□□□□□ -1.38
SSBP2-206ENST00000506960 PCNX4Q63HM2 1172 aa6.46□□□□□ -1.38
SSBP2-206ENST00000506960 TOP6BLQ8N6T0 577 aa6.46□□□□□ -1.38
SSBP2-206ENST00000506960 KCNN1Q92952 543 aa6.46□□□□□ -1.38
SSBP2-206ENST00000506960 SSU72Q9NP77 194 aaKnown RBP6.46□□□□□ -1.38
SSBP2-206ENST00000506960 RNF19AQ9NV58 838 aa6.46□□□□□ -1.38
SSBP2-206ENST00000506960 PATL2C9JE40 543 aaKnown RBP6.45□□□□□ -1.38
SSBP2-206ENST00000506960 SRFP11831 508 aa6.45□□□□□ -1.38
SSBP2-206ENST00000506960 GNA15P30679 374 aa6.45□□□□□ -1.38
SSBP2-206ENST00000506960 NFKB2Q00653 900 aa6.45□□□□□ -1.38
SSBP2-206ENST00000506960 C12orf40Q86WS4 652 aa6.45□□□□□ -1.38
SSBP2-206ENST00000506960 CCDC120Q96HB5 630 aa6.45□□□□□ -1.38
SSBP2-206ENST00000506960 PLAGL2Q9UPG8 496 aa6.45□□□□□ -1.38
SSBP2-206ENST00000506960 PRPF40AO75400 957 aaKnown RBP6.44□□□□□ -1.38
SSBP2-206ENST00000506960 CELA3BP08861 270 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 KRTAP10-2P60368 255 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 PTPN11Q06124 597 aaPredicted RBP6.44□□□□□ -1.38
SSBP2-206ENST00000506960 LRRC14Q15048 493 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 ZBTB37Q5TC79 503 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 KCNC2Q96PR1 638 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 PCDHA4Q9UN74 947 aa6.44□□□□□ -1.38
SSBP2-206ENST00000506960 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
SSBP2-206ENST00000506960 LRFN4Q6PJG9 635 aa6.43□□□□□ -1.38
SSBP2-206ENST00000506960 SND1Q7KZF4 910 aaKnown RBP eCLIP6.43□□□□□ -1.38
SSBP2-206ENST00000506960 FAM214BQ7L5A3 538 aa6.43□□□□□ -1.38
SSBP2-206ENST00000506960 HEXIM2Q96MH2 286 aaKnown RBP6.43□□□□□ -1.38
SSBP2-206ENST00000506960 FRMD6Q96NE9 622 aa6.43□□□□□ -1.38
SSBP2-206ENST00000506960 CYP8B1Q9UNU6 501 aa6.43□□□□□ -1.38
SSBP2-206ENST00000506960 ANKRD33BA6NCL7 494 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 FANCGO15287 622 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 EIF4BP23588 611 aaKnown RBP6.42□□□□□ -1.38
SSBP2-206ENST00000506960 GDNFP39905 211 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 INPP5AQ14642 412 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 SKOR2Q2VWA4 1001 aaPredicted RBP6.42□□□□□ -1.38
SSBP2-206ENST00000506960 SCARA3Q6AZY7 606 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 SV2BQ7L1I2 683 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 DUSP9Q99956 384 aaKnown RBP6.42□□□□□ -1.38
SSBP2-206ENST00000506960 PICK1Q9NRD5 415 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 PITPNM2Q9BZ72 1349 aa6.42□□□□□ -1.38
SSBP2-206ENST00000506960 ITIH2P19823 946 aa6.41□□□□□ -1.38
SSBP2-206ENST00000506960 TTBK2Q6IQ55 1244 aa6.41□□□□□ -1.38
SSBP2-206ENST00000506960 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.41□□□□□ -1.38
SSBP2-206ENST00000506960 ARMCX6Q7L4S7 300 aa6.41□□□□□ -1.38
SSBP2-206ENST00000506960 ELMO3Q96BJ8 720 aa6.41□□□□□ -1.38
SSBP2-206ENST00000506960 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
SSBP2-206ENST00000506960 PRDM10Q9NQV6 1147 aa6.41□□□□□ -1.38
SSBP2-206ENST00000506960 PRAMEF27A3QJZ7 478 aa6.4□□□□□ -1.38
SSBP2-206ENST00000506960 CDK8P49336 464 aa6.4□□□□□ -1.38
SSBP2-206ENST00000506960 AEBP1Q8IUX7 1158 aa6.4□□□□□ -1.38
SSBP2-206ENST00000506960 MARCH10Q8NA82 808 aaPredicted RBP6.4□□□□□ -1.38
SSBP2-206ENST00000506960 CCDC85BQ15834 202 aaPredicted RBP6.39□□□□□ -1.39
SSBP2-206ENST00000506960 EAPPQ56P03 285 aaPredicted RBP6.39□□□□□ -1.39
SSBP2-206ENST00000506960 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
SSBP2-206ENST00000506960 FBRSQ9HAH7 460 aa6.39□□□□□ -1.39
SSBP2-206ENST00000506960 AK5Q9Y6K8 562 aa6.39□□□□□ -1.39
SSBP2-206ENST00000506960 EOMESO95936 686 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 SEPT6Q14141 434 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 WIPI1Q5MNZ9 446 aaPredicted RBP6.38□□□□□ -1.39
SSBP2-206ENST00000506960 MEI1Q5TIA1 1274 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 DNAJC14Q6Y2X3 702 aaPredicted RBP6.38□□□□□ -1.39
SSBP2-206ENST00000506960 CDC37L1Q7L3B6 337 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 NPAS4Q8IUM7 802 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 TMEM151BQ8IW70 566 aa6.38□□□□□ -1.39
SSBP2-206ENST00000506960 SPACA3Q8IXA5 215 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms