RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 MTMR2Q13614 643 aa18.77■□□□□ 0.6
DDR1-258ENST00000506573 CERKLQ49MI3 558 aaPredicted RBP18.77■□□□□ 0.6
DDR1-258ENST00000506573 COA7Q96BR5 231 aa18.77■□□□□ 0.6
DDR1-258ENST00000506573 ECHDC1Q9NTX5 307 aa18.77■□□□□ 0.6
DDR1-258ENST00000506573 BIN2Q9UBW5 565 aaPredicted RBP18.77■□□□□ 0.6
DDR1-258ENST00000506573 TNPO2O14787 897 aaKnown RBP18.76■□□□□ 0.59
DDR1-258ENST00000506573 FAM110CQ1W6H9 321 aa18.76■□□□□ 0.59
DDR1-258ENST00000506573 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
DDR1-258ENST00000506573 TREML2Q5T2D2 321 aa18.76■□□□□ 0.59
DDR1-258ENST00000506573 FEZ1Q99689 392 aa18.76■□□□□ 0.59
DDR1-258ENST00000506573 DCTPP1Q9H773 170 aa18.76■□□□□ 0.59
DDR1-258ENST00000506573 MCM9Q9NXL9 1143 aa18.76■□□□□ 0.59
DDR1-258ENST00000506573 TNRC18O15417 2968 aaPredicted RBP18.75■□□□□ 0.59
DDR1-258ENST00000506573 GH2P01242 217 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 GRK4P32298 578 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 USP14P54578 494 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 UBXN2AP68543 259 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 CAP1Q01518 475 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 RRP1BQ14684 758 aaKnown RBP18.75■□□□□ 0.59
DDR1-258ENST00000506573 ABCB5Q2M3G0 1257 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 TATDN1Q6P1N9 297 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 USP17L2Q6R6M4 530 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 ANKRD13CQ8N6S4 541 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 SLAIN1Q8ND83 568 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 GTF3C2Q8WUA4 911 aaPredicted RBP18.75■□□□□ 0.59
DDR1-258ENST00000506573 DNAJC18Q9H819 358 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 ATP8A2Q9NTI2 1148 aa18.75■□□□□ 0.59
DDR1-258ENST00000506573 ADD2P35612 726 aa18.74■□□□□ 0.59
DDR1-258ENST00000506573 RRP1P56182 461 aaKnown RBP18.74■□□□□ 0.59
DDR1-258ENST00000506573 RAB3GAP1Q15042 981 aa18.74■□□□□ 0.59
DDR1-258ENST00000506573 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
DDR1-258ENST00000506573 SH3TC2Q8TF17 1288 aa18.74■□□□□ 0.59
DDR1-258ENST00000506573 ASCC2Q9H1I8 757 aaPredicted RBP18.74■□□□□ 0.59
DDR1-258ENST00000506573 FOCADQ5VW36 1801 aa18.74■□□□□ 0.59
DDR1-258ENST00000506573 TCRBV5S4A2TA0A5A2 114 aa18.73■□□□□ 0.59
DDR1-258ENST00000506573 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
DDR1-258ENST00000506573 HOXA7P31268 230 aaPredicted RBP18.73■□□□□ 0.59
DDR1-258ENST00000506573 CCAR1Q8IX12 1150 aaKnown RBP18.73■□□□□ 0.59
DDR1-258ENST00000506573 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
DDR1-258ENST00000506573 SWAP70Q9UH65 585 aa18.73■□□□□ 0.59
DDR1-258ENST00000506573 CENPFP49454 3210 aa18.73■□□□□ 0.59
DDR1-258ENST00000506573 MYO5AQ9Y4I1 1855 aaKnown RBP18.73■□□□□ 0.59
DDR1-258ENST00000506573 POTEFA5A3E0 1075 aa18.72■□□□□ 0.59
DDR1-258ENST00000506573 MBD4O95243 580 aa18.72■□□□□ 0.59
DDR1-258ENST00000506573 PRKCZQ05513 592 aa18.72■□□□□ 0.59
DDR1-258ENST00000506573 EDC3Q96F86 508 aaKnown RBP18.72■□□□□ 0.59
DDR1-258ENST00000506573 ARMT1Q9H993 441 aa18.72■□□□□ 0.59
DDR1-258ENST00000506573 DCP1AQ9NPI6 582 aaPredicted RBP18.72■□□□□ 0.59
DDR1-258ENST00000506573 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
DDR1-258ENST00000506573 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
DDR1-258ENST00000506573 MPHOSPH10O00566 681 aaKnown RBP18.71■□□□□ 0.59
DDR1-258ENST00000506573 ERC2O15083 957 aa18.71■□□□□ 0.59
DDR1-258ENST00000506573 MYCP01106 439 aaPredicted RBP18.71■□□□□ 0.59
DDR1-258ENST00000506573 CTGFP29279 349 aa18.71■□□□□ 0.59
DDR1-258ENST00000506573 PLCD1P51178 756 aa18.71■□□□□ 0.59
DDR1-258ENST00000506573 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
DDR1-258ENST00000506573 SDR42E1Q8WUS8 393 aa18.71■□□□□ 0.59
DDR1-258ENST00000506573 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
DDR1-258ENST00000506573 ZFYP08048 801 aaPredicted RBP18.7■□□□□ 0.58
DDR1-258ENST00000506573 IRF5Q13568 498 aa18.7■□□□□ 0.58
DDR1-258ENST00000506573 PRPF38BQ5VTL8 546 aaKnown RBP18.7■□□□□ 0.58
DDR1-258ENST00000506573 GPRC5AQ8NFJ5 357 aa18.7■□□□□ 0.58
DDR1-258ENST00000506573 CDK5RAP2Q96SN8 1893 aa18.7■□□□□ 0.58
DDR1-258ENST00000506573 MYH1P12882 1939 aa18.7■□□□□ 0.58
DDR1-258ENST00000506573 PTPRFP10586 1907 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 ADCY3O60266 1144 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 CAPN2P17655 700 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
DDR1-258ENST00000506573 FLT3LGP49771 235 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 HERVK_113P62684 666 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 AAMPQ13685 434 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 PXYLP1Q8TE99 480 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 CWC22Q9HCG8 908 aaKnown RBP18.69■□□□□ 0.58
DDR1-258ENST00000506573 SLC4A4Q9Y6R1 1079 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 TTC41PQ6P2S7 1318 aa18.69■□□□□ 0.58
DDR1-258ENST00000506573 LOC285556D6RIA3 1793 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L15C9J2P7 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L13C9JLJ4 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L11C9JVI0 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L18D6R9N7 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L22D6RA61 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L17D6RBQ6 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L19D6RCP7 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L20D6RJB6 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 SHMT1P34896 483 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 JAG1P78504 1218 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 USP17L24Q0WX57 530 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 C12orf42Q96LP6 360 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 P2RX7Q99572 595 aaKnown RBP18.68■□□□□ 0.58
DDR1-258ENST00000506573 KIAA1683Q9H0B3 1180 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 MORF4L1Q9UBU8 362 aa18.68■□□□□ 0.58
DDR1-258ENST00000506573 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 CCNA1P78396 465 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 GABPAQ06546 454 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 ZYXQ15942 572 aaKnown RBP18.67■□□□□ 0.58
DDR1-258ENST00000506573 TMEM179Q6ZVK1 233 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 CCDC17Q96LX7 622 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 RNF208Q9H0X6 261 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms